Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Cldn34c4-201ENSMUST00000052500 814 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm25699-201ENSMUST00000082896 167 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm44120-201ENSMUST00000203022 3023 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm42967-201ENSMUST00000198647 2312 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Olfr1309-202ENSMUST00000214537 4274 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Gm42768-201ENSMUST00000197734 2897 ntBASIC2.58□□□□□ -2
RTRAFQ9CQE8 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
RTRAFQ9CQE8 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
RTRAFQ9CQE8 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
RTRAFQ9CQE8 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC2.57□□□□□ -2
RTRAFQ9CQE8 Gm40020-201ENSMUST00000215677 1635 ntBASIC2.57□□□□□ -2
RTRAFQ9CQE8 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.57□□□□□ -2
RTRAFQ9CQE8 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
RTRAFQ9CQE8 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RTRAFQ9CQE8 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.57□□□□□ -2
RTRAFQ9CQE8 Gm11356-201ENSMUST00000118974 192 ntBASIC2.57□□□□□ -2
RTRAFQ9CQE8 Gm23228-201ENSMUST00000157296 270 ntBASIC2.57□□□□□ -2
RTRAFQ9CQE8 Gm22816-201ENSMUST00000157450 117 ntBASIC2.57□□□□□ -2
RTRAFQ9CQE8 Gm23666-201ENSMUST00000158053 116 ntBASIC2.57□□□□□ -2
RTRAFQ9CQE8 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC2.57□□□□□ -2
RTRAFQ9CQE8 Gm27921-201ENSMUST00000183968 108 ntBASIC2.57□□□□□ -2
RTRAFQ9CQE8 Gm27189-201ENSMUST00000184119 190 ntBASIC2.57□□□□□ -2
RTRAFQ9CQE8 Gm4854-201ENSMUST00000185902 574 ntBASIC2.57□□□□□ -2
RTRAFQ9CQE8 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC2.57□□□□□ -2
RTRAFQ9CQE8 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC2.57□□□□□ -2
RTRAFQ9CQE8 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC2.57□□□□□ -2
RTRAFQ9CQE8 Gm37239-201ENSMUST00000193510 141 ntBASIC2.57□□□□□ -2
RTRAFQ9CQE8 Gm37417-201ENSMUST00000195257 454 ntBASIC2.57□□□□□ -2
RTRAFQ9CQE8 Gm42593-201ENSMUST00000198469 377 ntBASIC2.57□□□□□ -2
RTRAFQ9CQE8 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.57□□□□□ -2
RTRAFQ9CQE8 Gm17838-201ENSMUST00000205872 876 ntBASIC2.57□□□□□ -2
RTRAFQ9CQE8 Gm45553-201ENSMUST00000209929 507 ntBASIC2.57□□□□□ -2
RTRAFQ9CQE8 Gm39147-201ENSMUST00000211376 465 ntBASIC2.57□□□□□ -2
RTRAFQ9CQE8 Gm18043-201ENSMUST00000216741 739 ntBASIC2.57□□□□□ -2
RTRAFQ9CQE8 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC2.57□□□□□ -2
RTRAFQ9CQE8 Gm19563-201ENSMUST00000222031 270 ntBASIC2.57□□□□□ -2
RTRAFQ9CQE8 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC2.57□□□□□ -2
RTRAFQ9CQE8 AC126275.2-201ENSMUST00000225224 253 ntBASIC2.57□□□□□ -2
RTRAFQ9CQE8 AC154640.2-201ENSMUST00000226324 472 ntBASIC2.57□□□□□ -2
RTRAFQ9CQE8 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RTRAFQ9CQE8 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC2.57□□□□□ -2
RTRAFQ9CQE8 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC2.57□□□□□ -2
RTRAFQ9CQE8 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC2.57□□□□□ -2
RTRAFQ9CQE8 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
RTRAFQ9CQE8 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC2.57□□□□□ -2
RTRAFQ9CQE8 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
RTRAFQ9CQE8 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC2.57□□□□□ -2
RTRAFQ9CQE8 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RTRAFQ9CQE8 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
RTRAFQ9CQE8 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.56□□□□□ -2
RTRAFQ9CQE8 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Mir19b-1-201ENSMUST00000102301 87 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Gm22269-201ENSMUST00000104002 130 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC2.56□□□□□ -2
RTRAFQ9CQE8 Gm15560-201ENSMUST00000117107 643 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Gm11582-201ENSMUST00000121041 236 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Gm11414-201ENSMUST00000121795 263 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Gm22561-201ENSMUST00000157331 84 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Gm23587-201ENSMUST00000157658 84 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Gm22961-201ENSMUST00000157964 106 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Gm22211-201ENSMUST00000158097 156 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Gm23112-201ENSMUST00000158606 125 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Ear-ps10-201ENSMUST00000161871 460 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC2.56□□□□□ -2
RTRAFQ9CQE8 Gm22392-201ENSMUST00000177971 107 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Gm25412-201ENSMUST00000180258 107 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC2.56□□□□□ -2
RTRAFQ9CQE8 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.56□□□□□ -2
RTRAFQ9CQE8 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Gm37616-201ENSMUST00000193974 322 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Gm43489-201ENSMUST00000196810 993 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC2.56□□□□□ -2
RTRAFQ9CQE8 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Gm44088-201ENSMUST00000204595 237 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC2.56□□□□□ -2
RTRAFQ9CQE8 Olfr512-202ENSMUST00000209620 1056 ntAPPRIS P1 BASIC2.56□□□□□ -2
RTRAFQ9CQE8 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC2.56□□□□□ -2
RTRAFQ9CQE8 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RTRAFQ9CQE8 Olfr1442-201ENSMUST00000057924 1065 ntAPPRIS P1 BASIC2.56□□□□□ -2
RTRAFQ9CQE8 Olfr512-201ENSMUST00000074730 1056 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC2.56□□□□□ -2
RTRAFQ9CQE8 Gm25480-201ENSMUST00000083217 133 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Gm23850-201ENSMUST00000083830 169 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC2.56□□□□□ -2
RTRAFQ9CQE8 Gm10704-201ENSMUST00000098952 730 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.56□□□□□ -2
RTRAFQ9CQE8 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
RTRAFQ9CQE8 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC2.56□□□□□ -2
RTRAFQ9CQE8 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC2.55□□□□□ -2
RTRAFQ9CQE8 AC159193.2-201ENSMUST00000220865 4251 ntBASIC2.55□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms