Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Gm24715-201ENSMUST00000102377 95 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Gm25308-201ENSMUST00000104171 158 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Gm14901-201ENSMUST00000119001 283 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Gm14776-201ENSMUST00000121029 887 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Gm22961-201ENSMUST00000157964 106 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Mir3473a-201ENSMUST00000175011 78 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Gm27025-201ENSMUST00000182392 942 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Gm27796-201ENSMUST00000183863 261 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Gm27163-201ENSMUST00000184767 409 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Gm29452-201ENSMUST00000187996 313 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Gm28860-201ENSMUST00000188103 313 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Gm28060-201ENSMUST00000191554 189 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Gm37828-201ENSMUST00000192496 432 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Gm18403-201ENSMUST00000192907 529 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Gm43217-201ENSMUST00000199513 367 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Gm45513-201ENSMUST00000210228 376 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Gm18225-201ENSMUST00000216708 742 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Gm6841-201ENSMUST00000220602 598 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 AC170086.1-201ENSMUST00000225190 497 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Gm9818-201ENSMUST00000050900 255 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.13□□□□□ -1.91
Rpa3Q9CQ71 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm14973-201ENSMUST00000117248 255 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm13504-201ENSMUST00000117490 316 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm11708-201ENSMUST00000119530 832 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm11229-201ENSMUST00000121993 437 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm5392-201ENSMUST00000122189 789 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm24787-201ENSMUST00000157380 123 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm24061-201ENSMUST00000157489 120 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm24138-201ENSMUST00000157572 114 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm25525-201ENSMUST00000177701 107 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm26178-201ENSMUST00000177706 107 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Mir5123-201ENSMUST00000177794 83 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm26465-201ENSMUST00000178517 107 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm24317-201ENSMUST00000178536 107 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm25021-201ENSMUST00000179184 107 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm21638-201ENSMUST00000179473 836 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm22995-201ENSMUST00000179670 107 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm24424-201ENSMUST00000179714 107 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm24389-201ENSMUST00000179962 107 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm25672-201ENSMUST00000180111 107 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm28628-201ENSMUST00000187006 264 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm28073-201ENSMUST00000187174 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm28629-201ENSMUST00000187309 263 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm29163-201ENSMUST00000188029 107 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm37219-201ENSMUST00000192036 926 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm43704-201ENSMUST00000196164 496 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Ighv1-79-201ENSMUST00000200152 350 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm6842-201ENSMUST00000211361 390 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 AC158142.3-201ENSMUST00000226230 675 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm23297-201ENSMUST00000083184 127 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm23815-201ENSMUST00000083231 107 ntBASIC3.12□□□□□ -1.91
Rpa3Q9CQ71 Gm23520-201ENSMUST00000093736 107 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms