Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm24819-201ENSMUST00000175094 166 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm22111-201ENSMUST00000178010 79 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm23687-201ENSMUST00000178664 79 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm24566-201ENSMUST00000179286 79 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm23305-201ENSMUST00000179342 79 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm26389-201ENSMUST00000179819 79 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm22130-201ENSMUST00000179979 79 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm22393-201ENSMUST00000180153 79 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm25085-201ENSMUST00000180298 79 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Mir6413-201ENSMUST00000184049 108 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm19637-201ENSMUST00000185933 579 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm18727-201ENSMUST00000185981 553 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm19177-201ENSMUST00000204520 613 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm39147-201ENSMUST00000211376 465 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 AC132384.5-201ENSMUST00000218562 226 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.12□□□□□ -1.91
Use1Q9CQ56 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm40598-201ENSMUST00000222953 547 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm4987-201ENSMUST00000078326 408 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm23136-201ENSMUST00000083425 99 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Use1Q9CQ56 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Use1Q9CQ56 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm42483-201ENSMUST00000197556 1742 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Use1Q9CQ56 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Use1Q9CQ56 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm26143-201ENSMUST00000104480 108 ntBASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm16445-201ENSMUST00000120399 714 ntBASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm12383-201ENSMUST00000120628 760 ntBASIC3.11□□□□□ -1.91
Use1Q9CQ56 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm5958-201ENSMUST00000147698 297 ntBASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm25883-201ENSMUST00000157781 271 ntBASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm24961-201ENSMUST00000157918 184 ntBASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm25860-201ENSMUST00000158252 126 ntBASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm3123-201ENSMUST00000163480 480 ntBASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Mir6943-201ENSMUST00000185186 66 ntBASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm42621-201ENSMUST00000198114 275 ntBASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm2189-201ENSMUST00000201419 429 ntBASIC3.11□□□□□ -1.91
Use1Q9CQ56 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm18903-201ENSMUST00000215343 480 ntBASIC3.11□□□□□ -1.91
Use1Q9CQ56 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.11□□□□□ -1.91
Use1Q9CQ56 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC3.11□□□□□ -1.91
Use1Q9CQ56 Zmym2-202ENSMUST00000223669 1281 ntBASIC3.11□□□□□ -1.91
Use1Q9CQ56 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Snord35b-201ENSMUST00000082833 87 ntBASIC3.11□□□□□ -1.91
Use1Q9CQ56 Mir132-201ENSMUST00000083603 66 ntBASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.11□□□□□ -1.91
Use1Q9CQ56 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC3.11□□□□□ -1.91
Use1Q9CQ56 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.11□□□□□ -1.91
Use1Q9CQ56 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.1□□□□□ -1.91
Use1Q9CQ56 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Use1Q9CQ56 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Use1Q9CQ56 Gm25169-201ENSMUST00000104190 129 ntBASIC3.1□□□□□ -1.91
Use1Q9CQ56 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Use1Q9CQ56 Gm15783-201ENSMUST00000117521 633 ntBASIC3.1□□□□□ -1.91
Use1Q9CQ56 Gm14172-201ENSMUST00000118255 644 ntBASIC3.1□□□□□ -1.91
Use1Q9CQ56 Gm12954-201ENSMUST00000118610 611 ntBASIC3.1□□□□□ -1.91
Use1Q9CQ56 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC3.1□□□□□ -1.91
Use1Q9CQ56 Gm22026-201ENSMUST00000122735 281 ntBASIC3.1□□□□□ -1.91
Use1Q9CQ56 Gm26141-201ENSMUST00000175299 126 ntBASIC3.1□□□□□ -1.91
Use1Q9CQ56 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC3.1□□□□□ -1.91
Use1Q9CQ56 Gm29064-201ENSMUST00000187014 813 ntBASIC3.1□□□□□ -1.91
Use1Q9CQ56 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC3.1□□□□□ -1.91
Use1Q9CQ56 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Use1Q9CQ56 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC3.1□□□□□ -1.91
Use1Q9CQ56 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC3.1□□□□□ -1.91
Use1Q9CQ56 Gm18384-201ENSMUST00000195974 808 ntBASIC3.1□□□□□ -1.91
Use1Q9CQ56 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.1□□□□□ -1.91
Use1Q9CQ56 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms