Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm25295-201ENSMUST00000122794 306 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Gm25883-201ENSMUST00000157781 271 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Gm23895-201ENSMUST00000158108 160 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Gm22521-201ENSMUST00000158272 134 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Gm25432-201ENSMUST00000158284 66 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Gm23409-201ENSMUST00000158516 237 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Ear-ps7-201ENSMUST00000161287 442 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Gm17711-201ENSMUST00000172028 237 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Gm7909-201ENSMUST00000182688 614 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Gm27374-201ENSMUST00000183660 81 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Gm27527-201ENSMUST00000183903 99 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Scgb2b6-201ENSMUST00000188132 330 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC2.37□□□□□ -2.03
Nup35Q8R4R6 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Gm37817-201ENSMUST00000195276 434 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Gm7624-201ENSMUST00000209702 435 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Gm7380-201ENSMUST00000211599 466 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 AC156790.5-201ENSMUST00000227075 231 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 AC157772.2-201ENSMUST00000228202 259 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 AC133189.2-201ENSMUST00000228527 392 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Gm23736-201ENSMUST00000082553 75 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 n-R5s85-201ENSMUST00000083453 113 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm44438-201ENSMUST00000204388 3236 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm24831-201ENSMUST00000116778 126 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm15074-201ENSMUST00000117603 936 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm13076-201ENSMUST00000118041 204 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm14986-201ENSMUST00000121262 1002 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm14903-201ENSMUST00000122435 537 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm23116-201ENSMUST00000158481 67 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm26362-201ENSMUST00000158865 315 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm16147-201ENSMUST00000162143 373 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm25525-201ENSMUST00000177701 107 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm26178-201ENSMUST00000177706 107 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm26465-201ENSMUST00000178517 107 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm24317-201ENSMUST00000178536 107 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm25021-201ENSMUST00000179184 107 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm26297-201ENSMUST00000179464 132 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm22995-201ENSMUST00000179670 107 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm24424-201ENSMUST00000179714 107 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm24389-201ENSMUST00000179962 107 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm25672-201ENSMUST00000180111 107 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm27330-201ENSMUST00000184689 132 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Mir6943-201ENSMUST00000185186 66 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm29163-201ENSMUST00000188029 107 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC2.36□□□□□ -2.03
Nup35Q8R4R6 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm36943-201ENSMUST00000194422 282 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm6112-201ENSMUST00000208037 629 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
Nup35Q8R4R6 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm5176-202ENSMUST00000220267 583 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC2.36□□□□□ -2.03
Nup35Q8R4R6 AC132260.2-201ENSMUST00000224482 344 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Nup35Q8R4R6 CT030254.3-201ENSMUST00000225959 1231 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm23815-201ENSMUST00000083231 107 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Mir27a-201ENSMUST00000083510 87 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm23520-201ENSMUST00000093736 107 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm8675-201ENSMUST00000201408 1856 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Nup35Q8R4R6 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.35□□□□□ -2.03
Nup35Q8R4R6 Gm6300-201ENSMUST00000192393 1498 ntBASIC2.35□□□□□ -2.03
Nup35Q8R4R6 Gm24125-201ENSMUST00000104105 137 ntBASIC2.35□□□□□ -2.03
Nup35Q8R4R6 Gm12427-201ENSMUST00000117719 302 ntBASIC2.35□□□□□ -2.03
Nup35Q8R4R6 Gm11577-201ENSMUST00000118030 737 ntBASIC2.35□□□□□ -2.03
Nup35Q8R4R6 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.35□□□□□ -2.03
Nup35Q8R4R6 Gm13349-201ENSMUST00000118436 411 ntBASIC2.35□□□□□ -2.03
Nup35Q8R4R6 Gm14591-201ENSMUST00000120407 518 ntBASIC2.35□□□□□ -2.03
Nup35Q8R4R6 Gm11456-201ENSMUST00000121070 256 ntBASIC2.35□□□□□ -2.03
Nup35Q8R4R6 Gm14577-201ENSMUST00000121134 256 ntBASIC2.35□□□□□ -2.03
Nup35Q8R4R6 Gm26020-201ENSMUST00000122729 183 ntBASIC2.35□□□□□ -2.03
Nup35Q8R4R6 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.35□□□□□ -2.03
Nup35Q8R4R6 Gm23325-201ENSMUST00000157422 129 ntBASIC2.35□□□□□ -2.03
Nup35Q8R4R6 Gm23028-201ENSMUST00000158773 265 ntBASIC2.35□□□□□ -2.03
Nup35Q8R4R6 Gm24876-201ENSMUST00000158780 92 ntBASIC2.35□□□□□ -2.03
Nup35Q8R4R6 Gm20672-201ENSMUST00000176605 261 ntBASIC2.35□□□□□ -2.03
Nup35Q8R4R6 Gm21842-201ENSMUST00000177552 498 ntBASIC2.35□□□□□ -2.03
Nup35Q8R4R6 Gm21626-201ENSMUST00000177791 498 ntBASIC2.35□□□□□ -2.03
Nup35Q8R4R6 Gm21562-201ENSMUST00000177888 498 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms