Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm17893-201ENSMUST00000203017 770 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm44824-201ENSMUST00000207021 229 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm44830-201ENSMUST00000207667 584 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm45382-201ENSMUST00000210607 151 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm18644-201ENSMUST00000211458 815 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm19540-201ENSMUST00000221843 810 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm18441-201ENSMUST00000223539 617 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 AC126275.1-201ENSMUST00000224881 446 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 AC158981.3-201ENSMUST00000226844 1024 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 AC115878.1-201ENSMUST00000227247 334 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm25205-201ENSMUST00000082841 103 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm26121-201ENSMUST00000083364 162 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Mir26a-1-201ENSMUST00000083579 90 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm44708-201ENSMUST00000205580 2237 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Gm9496-201ENSMUST00000191295 1601 ntBASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Gm14125-201ENSMUST00000113442 680 ntBASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Gm13555-201ENSMUST00000121668 319 ntBASIC4.18□□□□□ -1.74
Nup88Q8CEC0 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Gm24244-201ENSMUST00000157317 130 ntBASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Gm22310-201ENSMUST00000157509 116 ntBASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Gm23666-201ENSMUST00000158053 116 ntBASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Gm24730-201ENSMUST00000158228 117 ntBASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Gm8224-201ENSMUST00000166178 497 ntBASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Gm7346-201ENSMUST00000169661 476 ntBASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Gm29452-201ENSMUST00000187996 313 ntBASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Gm28860-201ENSMUST00000188103 313 ntBASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Gm37288-201ENSMUST00000193963 334 ntBASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Gm38356-201ENSMUST00000194313 408 ntBASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Gm43601-201ENSMUST00000196294 945 ntBASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC4.18□□□□□ -1.74
Nup88Q8CEC0 AC161520.1-201ENSMUST00000210954 939 ntBASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Mir101b-201ENSMUST00000083622 97 ntBASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Nup88Q8CEC0 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC4.17□□□□□ -1.74
Nup88Q8CEC0 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Gm22115-201ENSMUST00000103976 133 ntBASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Gm23923-201ENSMUST00000104108 133 ntBASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Gm15110-201ENSMUST00000117545 881 ntBASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Gm13076-201ENSMUST00000118041 204 ntBASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Gm26045-201ENSMUST00000157862 97 ntBASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Ang-ps3-201ENSMUST00000177964 433 ntBASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Gm18727-201ENSMUST00000185981 553 ntBASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Nup88Q8CEC0 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Gm20811-201ENSMUST00000190500 553 ntBASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Gm28552-201ENSMUST00000190725 388 ntBASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Gm7182-201ENSMUST00000193351 732 ntBASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Gm42958-201ENSMUST00000197595 318 ntBASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Gm44355-201ENSMUST00000200417 104 ntBASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Gm45420-201ENSMUST00000211243 425 ntBASIC4.17□□□□□ -1.74
Nup88Q8CEC0 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Gm19987-201ENSMUST00000216339 499 ntBASIC4.17□□□□□ -1.74
Nup88Q8CEC0 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC4.17□□□□□ -1.74
Nup88Q8CEC0 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC4.17□□□□□ -1.74
Nup88Q8CEC0 AC117797.2-201ENSMUST00000224419 531 ntBASIC4.17□□□□□ -1.74
Nup88Q8CEC0 AC167977.2-201ENSMUST00000225676 682 ntBASIC4.17□□□□□ -1.74
Nup88Q8CEC0 AC122937.1-201ENSMUST00000226405 793 ntBASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Gm22293-201ENSMUST00000083314 109 ntBASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Mir421-201ENSMUST00000083575 76 ntBASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Snord15a-201ENSMUST00000083888 148 ntBASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Gm20679-201ENSMUST00000177285 1402 ntBASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Nup88Q8CEC0 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Nup88Q8CEC0 Gm36927-201ENSMUST00000192504 1841 ntBASIC4.16□□□□□ -1.74
Nup88Q8CEC0 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Nup88Q8CEC0 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Nup88Q8CEC0 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Nup88Q8CEC0 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 159.7 ms