Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Gm45804-201ENSMUST00000212137 3435 ntBASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
Usp40Q8BWR4 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Gm9850-201ENSMUST00000117916 227 ntBASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Gm6584-201ENSMUST00000119671 447 ntBASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Gm8430-201ENSMUST00000119780 471 ntBASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Gm13737-201ENSMUST00000119793 232 ntBASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Gm14867-201ENSMUST00000120156 866 ntBASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Gm13788-201ENSMUST00000120767 601 ntBASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Gm23098-201ENSMUST00000157552 299 ntBASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Gm22398-201ENSMUST00000174941 125 ntBASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Gm25731-201ENSMUST00000175167 125 ntBASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Gm28257-201ENSMUST00000185244 463 ntBASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Gm17929-201ENSMUST00000186851 627 ntBASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Gm8041-201ENSMUST00000199755 616 ntBASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Gm45474-201ENSMUST00000209471 408 ntBASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Usp40Q8BWR4 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Gm37696-201ENSMUST00000194223 3349 ntBASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Usp40Q8BWR4 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm13268-201ENSMUST00000117485 433 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm13379-201ENSMUST00000118053 621 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm15313-201ENSMUST00000119179 282 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm25525-201ENSMUST00000177701 107 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm26178-201ENSMUST00000177706 107 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm23568-201ENSMUST00000177960 92 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm26465-201ENSMUST00000178517 107 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm24317-201ENSMUST00000178536 107 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm25021-201ENSMUST00000179184 107 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm24829-201ENSMUST00000179245 92 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm22995-201ENSMUST00000179670 107 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm24424-201ENSMUST00000179714 107 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm24389-201ENSMUST00000179962 107 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm25672-201ENSMUST00000180111 107 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm29163-201ENSMUST00000188029 107 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm38234-201ENSMUST00000195204 421 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC5.72□□□□□ -1.49
Usp40Q8BWR4 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm45796-201ENSMUST00000212483 114 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm5649-201ENSMUST00000217918 951 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm19181-201ENSMUST00000218891 940 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp40Q8BWR4 n-R5s37-201ENSMUST00000082533 118 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm23815-201ENSMUST00000083231 107 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm23520-201ENSMUST00000093736 107 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Usp40Q8BWR4 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.72□□□□□ -1.49
Usp40Q8BWR4 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Usp40Q8BWR4 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Usp40Q8BWR4 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Usp40Q8BWR4 Gm42967-201ENSMUST00000198647 2312 ntBASIC5.71□□□□□ -1.49
Usp40Q8BWR4 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Usp40Q8BWR4 Gm5248-201ENSMUST00000186108 4046 ntBASIC5.71□□□□□ -1.5
Usp40Q8BWR4 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Usp40Q8BWR4 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Usp40Q8BWR4 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Usp40Q8BWR4 Gm9059-201ENSMUST00000118319 183 ntBASIC5.71□□□□□ -1.5
Usp40Q8BWR4 Gm15113-201ENSMUST00000119280 836 ntBASIC5.71□□□□□ -1.5
Usp40Q8BWR4 Gm13603-201ENSMUST00000119404 83 ntBASIC5.71□□□□□ -1.5
Usp40Q8BWR4 Gm14516-201ENSMUST00000120012 252 ntBASIC5.71□□□□□ -1.5
Usp40Q8BWR4 Gm12095-201ENSMUST00000121962 816 ntBASIC5.71□□□□□ -1.5
Usp40Q8BWR4 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Usp40Q8BWR4 Gm24550-201ENSMUST00000158648 279 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms