Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm13676-201ENSMUST00000122185 591 ntBASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 Gm24969-201ENSMUST00000180331 79 ntBASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 Gm6947-201ENSMUST00000186254 78 ntBASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 Gm37239-201ENSMUST00000193510 141 ntBASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 AC167202.1-201ENSMUST00000219027 331 ntBASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 CT571256.1-201ENSMUST00000226045 585 ntBASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Gm7123-201ENSMUST00000117647 213 ntBASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Gm11704-201ENSMUST00000120031 214 ntBASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Gm14687-201ENSMUST00000120206 363 ntBASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Gm12543-201ENSMUST00000120410 543 ntBASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Gm13973-201ENSMUST00000121371 894 ntBASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Gm14253-201ENSMUST00000122112 639 ntBASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Gm14578-201ENSMUST00000122166 391 ntBASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Gm23887-201ENSMUST00000122683 172 ntBASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Gm26362-201ENSMUST00000158865 315 ntBASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Gm27903-201ENSMUST00000175482 126 ntBASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Gm38076-201ENSMUST00000193889 450 ntBASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 AC154552.6-201ENSMUST00000221365 1342 ntBASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ccdc40Q8BI79 Gm14910-201ENSMUST00000121037 1805 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Gm5583-201ENSMUST00000174328 1519 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Gm25169-201ENSMUST00000104190 129 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Gm15268-201ENSMUST00000118845 352 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Mup-ps12-201ENSMUST00000126217 549 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Gm23716-201ENSMUST00000157348 144 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Gm23540-201ENSMUST00000157543 164 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Gm17117-201ENSMUST00000163665 299 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Gm19898-201ENSMUST00000177490 251 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Gm18410-201ENSMUST00000207199 577 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Gm44919-201ENSMUST00000208587 1073 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Gm18645-201ENSMUST00000209593 651 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Gm45539-201ENSMUST00000210313 428 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 AC093926.1-201ENSMUST00000213730 243 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Gm18015-201ENSMUST00000214879 316 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 AC167977.1-201ENSMUST00000221384 234 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Gm18338-201ENSMUST00000222381 560 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 AC158981.3-201ENSMUST00000226844 1024 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Mir346-201ENSMUST00000083547 98 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.67□□□□□ -1.82
Ccdc40Q8BI79 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 Mir693-201ENSMUST00000102187 89 ntBASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 Gm16005-201ENSMUST00000120515 269 ntBASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 Gm26276-201ENSMUST00000157099 109 ntBASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ccdc40Q8BI79 Gm28010-201ENSMUST00000179485 126 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms