Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Mir105-201ENSMUST00000104655 80 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm13386-201ENSMUST00000117677 124 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm15553-201ENSMUST00000118757 430 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm14240-201ENSMUST00000120353 546 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm22514-201ENSMUST00000122547 308 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm25965-201ENSMUST00000157170 93 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm24636-201ENSMUST00000158673 288 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm15946-201ENSMUST00000160654 423 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm5258-201ENSMUST00000165437 327 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm22166-201ENSMUST00000178419 121 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm23288-201ENSMUST00000179213 121 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Mir6541-201ENSMUST00000183649 110 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm27957-201ENSMUST00000184054 127 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm27539-201ENSMUST00000184971 224 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm36984-201ENSMUST00000192770 235 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm43604-201ENSMUST00000199799 705 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm43026-201ENSMUST00000202972 325 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm18306-201ENSMUST00000207338 569 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm18116-201ENSMUST00000220920 537 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm7093-201ENSMUST00000223004 581 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 AC102291.2-201ENSMUST00000228083 367 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Olfr1019-202ENSMUST00000213515 3031 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm15443-201ENSMUST00000118947 820 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm13239-201ENSMUST00000119920 637 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm12087-201ENSMUST00000121878 258 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm22199-201ENSMUST00000122660 126 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm25559-201ENSMUST00000157182 74 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm25427-201ENSMUST00000157605 103 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm16101-201ENSMUST00000160695 430 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm25670-201ENSMUST00000178423 107 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm26239-201ENSMUST00000178842 107 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm24267-201ENSMUST00000179841 107 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm27695-201ENSMUST00000184301 91 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm28414-201ENSMUST00000190111 294 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm28211-201ENSMUST00000190920 315 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm44349-201ENSMUST00000197048 123 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm45173-201ENSMUST00000206819 305 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm45590-201ENSMUST00000209715 262 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm18016-201ENSMUST00000216119 801 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm18113-201ENSMUST00000220630 303 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm24292-201ENSMUST00000082888 107 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 AC125532.1-201ENSMUST00000216210 2334 ntBASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
Ubfd1Q78JW9 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Ubfd1Q78JW9 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms