Protein–RNA interactions for Protein: Q6IFX3

Krt40, Keratin, type I cytoskeletal 40, mousemouse

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt40Q6IFX3 Gm11352-201ENSMUST00000119264 517 ntBASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Gm14128-201ENSMUST00000119514 1011 ntBASIC4.59□□□□□ -1.67
Krt40Q6IFX3 2810403D21Rik-203ENSMUST00000131640 546 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Gm13092-201ENSMUST00000136346 260 ntBASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Gm3030-201ENSMUST00000163410 516 ntBASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Gm25451-201ENSMUST00000177832 121 ntBASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Gm29148-201ENSMUST00000188140 336 ntBASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Gm28802-201ENSMUST00000188624 944 ntBASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Gm37603-201ENSMUST00000192368 219 ntBASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Gm37239-201ENSMUST00000193510 141 ntBASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.59□□□□□ -1.67
Krt40Q6IFX3 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Gm42666-201ENSMUST00000201954 152 ntBASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Krt40Q6IFX3 AC187103.4-202ENSMUST00000225091 230 ntBASIC4.59□□□□□ -1.67
Krt40Q6IFX3 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Gm24610-201ENSMUST00000083270 109 ntBASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Mir465c-1-201ENSMUST00000093560 81 ntBASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Krt40Q6IFX3 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Krt40Q6IFX3 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.59□□□□□ -1.68
Krt40Q6IFX3 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Krt40Q6IFX3 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
Krt40Q6IFX3 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm44625-201ENSMUST00000207838 1561 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm37598-201ENSMUST00000194506 1301 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm23322-201ENSMUST00000104464 167 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm11600-201ENSMUST00000119592 240 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm13627-201ENSMUST00000119700 706 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm14785-201ENSMUST00000120185 539 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm11448-201ENSMUST00000120427 450 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm12006-201ENSMUST00000120786 403 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm22219-201ENSMUST00000157562 319 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm23902-201ENSMUST00000157571 134 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm25224-201ENSMUST00000158195 68 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm22841-201ENSMUST00000158443 62 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm17421-201ENSMUST00000167845 674 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm20526-201ENSMUST00000173416 158 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm26746-201ENSMUST00000181722 487 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm9236-201ENSMUST00000196892 587 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm18597-201ENSMUST00000209519 694 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.58□□□□□ -1.68
Krt40Q6IFX3 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.58□□□□□ -1.68
Krt40Q6IFX3 CT573085.1-201ENSMUST00000224279 1197 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Krt40Q6IFX3 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Krt40Q6IFX3 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Krt40Q6IFX3 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Krt40Q6IFX3 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.57□□□□□ -1.68
Krt40Q6IFX3 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Krt40Q6IFX3 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Krt40Q6IFX3 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.57□□□□□ -1.68
Krt40Q6IFX3 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Krt40Q6IFX3 Gm11372-201ENSMUST00000117348 570 ntBASIC4.57□□□□□ -1.68
Krt40Q6IFX3 Gm15783-201ENSMUST00000117521 633 ntBASIC4.57□□□□□ -1.68
Krt40Q6IFX3 Gm15613-201ENSMUST00000118396 326 ntBASIC4.57□□□□□ -1.68
Krt40Q6IFX3 Gm15268-201ENSMUST00000118845 352 ntBASIC4.57□□□□□ -1.68
Krt40Q6IFX3 Gm14835-201ENSMUST00000119039 315 ntBASIC4.57□□□□□ -1.68
Krt40Q6IFX3 Gm14861-201ENSMUST00000119451 455 ntBASIC4.57□□□□□ -1.68
Krt40Q6IFX3 Gm12335-201ENSMUST00000119738 327 ntBASIC4.57□□□□□ -1.68
Krt40Q6IFX3 Gm14655-201ENSMUST00000120124 578 ntBASIC4.57□□□□□ -1.68
Krt40Q6IFX3 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Krt40Q6IFX3 Gm22480-201ENSMUST00000122568 128 ntBASIC4.57□□□□□ -1.68
Krt40Q6IFX3 Gm25106-201ENSMUST00000122672 134 ntBASIC4.57□□□□□ -1.68
Krt40Q6IFX3 Gm22059-201ENSMUST00000157544 104 ntBASIC4.57□□□□□ -1.68
Krt40Q6IFX3 Gm24505-201ENSMUST00000157682 126 ntBASIC4.57□□□□□ -1.68
Krt40Q6IFX3 Gm23084-201ENSMUST00000157850 114 ntBASIC4.57□□□□□ -1.68
Krt40Q6IFX3 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC4.57□□□□□ -1.68
Krt40Q6IFX3 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Krt40Q6IFX3 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms