Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Trim27Q62158 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.26□□□□□ -1.73
Trim27Q62158 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim27Q62158 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim27Q62158 Gm14913-201ENSMUST00000120011 1093 ntBASIC4.25□□□□□ -1.73
Trim27Q62158 Gm6373-201ENSMUST00000121026 360 ntBASIC4.25□□□□□ -1.73
Trim27Q62158 Gm24961-201ENSMUST00000157918 184 ntBASIC4.25□□□□□ -1.73
Trim27Q62158 Gm6486-201ENSMUST00000166202 434 ntBASIC4.25□□□□□ -1.73
Trim27Q62158 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Trim27Q62158 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim27Q62158 Gm28637-201ENSMUST00000179424 345 ntBASIC4.25□□□□□ -1.73
Trim27Q62158 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim27Q62158 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim27Q62158 Gm28917-201ENSMUST00000187294 237 ntBASIC4.25□□□□□ -1.73
Trim27Q62158 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim27Q62158 Gm21489-201ENSMUST00000189668 818 ntBASIC4.25□□□□□ -1.73
Trim27Q62158 Gm20811-201ENSMUST00000190500 553 ntBASIC4.25□□□□□ -1.73
Trim27Q62158 Gm28766-201ENSMUST00000191086 234 ntBASIC4.25□□□□□ -1.73
Trim27Q62158 Ighv1-6-201ENSMUST00000193849 293 ntBASIC4.25□□□□□ -1.73
Trim27Q62158 Gm37431-201ENSMUST00000195102 111 ntBASIC4.25□□□□□ -1.73
Trim27Q62158 Gm44016-201ENSMUST00000203463 164 ntBASIC4.25□□□□□ -1.73
Trim27Q62158 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim27Q62158 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.25□□□□□ -1.73
Trim27Q62158 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim27Q62158 AC118006.1-201ENSMUST00000224211 501 ntBASIC4.25□□□□□ -1.73
Trim27Q62158 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim27Q62158 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Trim27Q62158 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim27Q62158 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.25□□□□□ -1.73
Trim27Q62158 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Trim27Q62158 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim27Q62158 Gm38286-201ENSMUST00000195128 3105 ntBASIC4.24□□□□□ -1.73
Trim27Q62158 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trim27Q62158 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim27Q62158 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trim27Q62158 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Trim27Q62158 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trim27Q62158 Gm25560-201ENSMUST00000104606 176 ntBASIC4.24□□□□□ -1.73
Trim27Q62158 Gm14811-201ENSMUST00000117070 117 ntBASIC4.24□□□□□ -1.73
Trim27Q62158 Gm9157-201ENSMUST00000117673 225 ntBASIC4.24□□□□□ -1.73
Trim27Q62158 Gm14731-201ENSMUST00000119216 376 ntBASIC4.24□□□□□ -1.73
Trim27Q62158 Gm15014-201ENSMUST00000120742 258 ntBASIC4.24□□□□□ -1.73
Trim27Q62158 Gm13868-201ENSMUST00000122411 294 ntBASIC4.24□□□□□ -1.73
Trim27Q62158 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim27Q62158 Gm23540-201ENSMUST00000157543 164 ntBASIC4.24□□□□□ -1.73
Trim27Q62158 Gm24819-201ENSMUST00000175094 166 ntBASIC4.24□□□□□ -1.73
Trim27Q62158 Gm28030-201ENSMUST00000184987 138 ntBASIC4.24□□□□□ -1.73
Trim27Q62158 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC4.24□□□□□ -1.73
Trim27Q62158 Gm5317-201ENSMUST00000204445 847 ntBASIC4.24□□□□□ -1.73
Trim27Q62158 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.24□□□□□ -1.73
Trim27Q62158 Gm39147-201ENSMUST00000211376 465 ntBASIC4.24□□□□□ -1.73
Trim27Q62158 Gm45530-201ENSMUST00000211658 225 ntBASIC4.24□□□□□ -1.73
Trim27Q62158 AL929285.1-201ENSMUST00000215522 229 ntBASIC4.24□□□□□ -1.73
Trim27Q62158 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.24□□□□□ -1.73
Trim27Q62158 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.24□□□□□ -1.73
Trim27Q62158 AC154426.1-201ENSMUST00000225614 1132 ntBASIC4.24□□□□□ -1.73
Trim27Q62158 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim27Q62158 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim27Q62158 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Trim27Q62158 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim27Q62158 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Trim27Q62158 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Trim27Q62158 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Trim27Q62158 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim27Q62158 Gm43834-201ENSMUST00000197097 4830 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trim27Q62158 Gm20541-201ENSMUST00000173035 1406 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 Gm42534-201ENSMUST00000196063 1754 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 Gm24951-201ENSMUST00000102182 109 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Trim27Q62158 Gm24987-201ENSMUST00000104453 134 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 Gm13273-201ENSMUST00000119737 159 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 Gm14238-201ENSMUST00000120227 323 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 Gm13555-201ENSMUST00000121668 319 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 Gm22320-201ENSMUST00000157149 312 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 Gm26171-201ENSMUST00000158422 131 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC4.23□□□□□ -1.73
Trim27Q62158 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Trim27Q62158 Gm25026-201ENSMUST00000175017 188 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 Gm25817-201ENSMUST00000177758 121 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 Gm24766-201ENSMUST00000179182 121 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 Gm29013-201ENSMUST00000187431 237 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 Gm37578-201ENSMUST00000192256 1177 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 Gm9379-201ENSMUST00000196790 646 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 Gm29920-201ENSMUST00000206876 754 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Trim27Q62158 Gm7380-201ENSMUST00000211599 466 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 Gm35405-201ENSMUST00000218754 400 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.23□□□□□ -1.73
Trim27Q62158 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Trim27Q62158 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
Trim27Q62158 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Trim27Q62158 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Trim27Q62158 Gm23736-201ENSMUST00000082553 75 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms