Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CtcfQ61164 Mir6996-201ENSMUST00000183922 61 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Gm27611-201ENSMUST00000184690 108 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Gm29259-201ENSMUST00000186396 694 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Gm37416-201ENSMUST00000193596 318 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Gm42451-201ENSMUST00000197410 244 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Gm43142-201ENSMUST00000198670 361 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Gm42850-201ENSMUST00000202094 201 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Gm18691-201ENSMUST00000203593 872 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Gm8774-201ENSMUST00000203621 692 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Gm44852-201ENSMUST00000207950 369 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC4.28□□□□□ -1.72
CtcfQ61164 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC4.28□□□□□ -1.72
CtcfQ61164 Gm18016-201ENSMUST00000216119 801 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 AC158521.1-201ENSMUST00000225295 660 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 AC137871.2-201ENSMUST00000226482 289 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CtcfQ61164 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CtcfQ61164 Gm25404-201ENSMUST00000082970 107 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Mir370-201ENSMUST00000083499 79 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Gm24254-201ENSMUST00000083702 104 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Gm15095-201ENSMUST00000118996 1430 ntBASIC4.28□□□□□ -1.72
CtcfQ61164 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CtcfQ61164 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
CtcfQ61164 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CtcfQ61164 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Gm37848-201ENSMUST00000195288 3103 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CtcfQ61164 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CtcfQ61164 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
CtcfQ61164 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CtcfQ61164 BC051076-202ENSMUST00000199477 2868 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CtcfQ61164 Gm4736-201ENSMUST00000100870 380 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Gm26273-201ENSMUST00000104180 131 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Gm23133-201ENSMUST00000104255 135 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Gm12495-201ENSMUST00000119750 447 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Gm11403-201ENSMUST00000122195 369 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Gm13868-201ENSMUST00000122411 294 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Gm25104-201ENSMUST00000122476 163 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Gm23789-201ENSMUST00000122536 301 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Gm24517-201ENSMUST00000122560 107 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CtcfQ61164 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CtcfQ61164 Gm26349-201ENSMUST00000157530 130 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Gm23905-201ENSMUST00000157568 109 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Gm23198-201ENSMUST00000158811 91 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Gm26362-201ENSMUST00000158865 315 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Gm26365-201ENSMUST00000179177 94 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Gm21070-201ENSMUST00000182425 985 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Gm29334-201ENSMUST00000190334 357 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Gm38146-201ENSMUST00000194121 1293 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Gm29950-201ENSMUST00000195273 237 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Gm43096-201ENSMUST00000196173 421 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Gm4045-201ENSMUST00000204076 310 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC4.27□□□□□ -1.73
CtcfQ61164 Gm6112-201ENSMUST00000208037 629 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CtcfQ61164 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CtcfQ61164 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC4.27□□□□□ -1.73
CtcfQ61164 AC154592.1-201ENSMUST00000225784 574 ntBASIC4.27□□□□□ -1.73
CtcfQ61164 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CtcfQ61164 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CtcfQ61164 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CtcfQ61164 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CtcfQ61164 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CtcfQ61164 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CtcfQ61164 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CtcfQ61164 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.26□□□□□ -1.73
CtcfQ61164 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.26□□□□□ -1.73
CtcfQ61164 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CtcfQ61164 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CtcfQ61164 Gm12814-201ENSMUST00000117091 846 ntBASIC4.26□□□□□ -1.73
CtcfQ61164 Gm13555-201ENSMUST00000121668 319 ntBASIC4.26□□□□□ -1.73
CtcfQ61164 Gm6058-201ENSMUST00000154261 399 ntBASIC4.26□□□□□ -1.73
CtcfQ61164 Gm24961-201ENSMUST00000157918 184 ntBASIC4.26□□□□□ -1.73
CtcfQ61164 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CtcfQ61164 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CtcfQ61164 Gm7346-201ENSMUST00000169661 476 ntBASIC4.26□□□□□ -1.73
CtcfQ61164 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.26□□□□□ -1.73
CtcfQ61164 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.26□□□□□ -1.73
CtcfQ61164 Gm27233-201ENSMUST00000184030 307 ntBASIC4.26□□□□□ -1.73
CtcfQ61164 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CtcfQ61164 Gm27964-201ENSMUST00000185195 62 ntBASIC4.26□□□□□ -1.73
CtcfQ61164 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.26□□□□□ -1.73
CtcfQ61164 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC4.26□□□□□ -1.73
CtcfQ61164 Gm37054-201ENSMUST00000193481 543 ntBASIC4.26□□□□□ -1.73
CtcfQ61164 Gm38053-201ENSMUST00000193938 160 ntBASIC4.26□□□□□ -1.73
CtcfQ61164 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CtcfQ61164 Gm43405-201ENSMUST00000198642 337 ntBASIC4.26□□□□□ -1.73
CtcfQ61164 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CtcfQ61164 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
CtcfQ61164 Gm5917-201ENSMUST00000217638 721 ntBASIC4.26□□□□□ -1.73
CtcfQ61164 AC158981.3-202ENSMUST00000228906 523 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms