Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 AC131068.1-201ENSMUST00000226891 482 ntBASIC3.2□□□□□ -1.9
Usf1Q61069 AC121542.1-201ENSMUST00000227245 721 ntBASIC3.2□□□□□ -1.9
Usf1Q61069 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Usf1Q61069 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
Usf1Q61069 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Usf1Q61069 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Usf1Q61069 Olfr203-201ENSMUST00000089305 924 ntBASIC3.2□□□□□ -1.9
Usf1Q61069 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.2□□□□□ -1.9
Usf1Q61069 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Usf1Q61069 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.2□□□□□ -1.9
Usf1Q61069 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.2□□□□□ -1.9
Usf1Q61069 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC3.2□□□□□ -1.9
Usf1Q61069 AC153881.3-201ENSMUST00000218494 1561 ntBASIC3.2□□□□□ -1.9
Usf1Q61069 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Usf1Q61069 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Usf1Q61069 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Usf1Q61069 Vmn2r-ps43-201ENSMUST00000173798 2473 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Usf1Q61069 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Usf1Q61069 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Usf1Q61069 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Usf1Q61069 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Usf1Q61069 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Usf1Q61069 Gm25313-201ENSMUST00000101817 116 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Usf1Q61069 Gm25539-201ENSMUST00000116886 122 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm14981-201ENSMUST00000117325 943 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm12722-201ENSMUST00000118507 493 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm15377-201ENSMUST00000119594 246 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm15116-201ENSMUST00000122248 663 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Usf1Q61069 Gm3025-201ENSMUST00000163454 489 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm2878-201ENSMUST00000170173 486 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm18595-201ENSMUST00000175736 1068 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.19□□□□□ -1.9
Usf1Q61069 Gm23287-201ENSMUST00000179427 116 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm23143-201ENSMUST00000180137 116 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm25412-201ENSMUST00000180258 107 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm6501-201ENSMUST00000187178 916 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm18505-201ENSMUST00000187360 790 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.19□□□□□ -1.9
Usf1Q61069 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.19□□□□□ -1.9
Usf1Q61069 Gm20776-201ENSMUST00000189940 700 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm28552-201ENSMUST00000190725 388 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm38088-201ENSMUST00000195829 241 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm43531-201ENSMUST00000200676 1114 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm42758-201ENSMUST00000202146 283 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm18327-201ENSMUST00000202426 830 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.19□□□□□ -1.9
Usf1Q61069 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC3.19□□□□□ -1.9
Usf1Q61069 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Usf1Q61069 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.19□□□□□ -1.9
Usf1Q61069 Gm24871-201ENSMUST00000083099 116 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm26121-201ENSMUST00000083364 162 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Usf1Q61069 Rnu5g-201ENSMUST00000093721 116 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Usf1Q61069 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.19□□□□□ -1.9
Usf1Q61069 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Usf1Q61069 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Usf1Q61069 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.19□□□□□ -1.9
Usf1Q61069 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Usf1Q61069 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Usf1Q61069 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Usf1Q61069 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Usf1Q61069 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.18□□□□□ -1.9
Usf1Q61069 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Usf1Q61069 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Usf1Q61069 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Usf1Q61069 Mir592-201ENSMUST00000102113 96 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.18□□□□□ -1.9
Usf1Q61069 Gm14816-201ENSMUST00000117174 294 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 Gm13607-201ENSMUST00000117875 539 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Usf1Q61069 Gm15193-201ENSMUST00000120224 865 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 Mir6413-201ENSMUST00000184049 108 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC3.18□□□□□ -1.9
Usf1Q61069 Gm28282-201ENSMUST00000186072 186 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 Gm28594-201ENSMUST00000187022 661 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Usf1Q61069 Gm37708-201ENSMUST00000192337 895 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 Gm37575-201ENSMUST00000195467 309 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.18□□□□□ -1.9
Usf1Q61069 Gm8249-201ENSMUST00000219225 465 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Usf1Q61069 Gm8274-201ENSMUST00000219820 463 ntBASIC3.18□□□□□ -1.9
Usf1Q61069 AC152979.4-201ENSMUST00000219893 379 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms