Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Gm14521-201ENSMUST00000119545 350 ntBASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Gm11693-201ENSMUST00000119625 565 ntBASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Gm11357-201ENSMUST00000119758 954 ntBASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Gm15168-201ENSMUST00000121057 316 ntBASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Gm22106-201ENSMUST00000122544 127 ntBASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Gm2830-201ENSMUST00000140330 385 ntBASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Gm23501-201ENSMUST00000157744 256 ntBASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Gm19807-201ENSMUST00000173971 667 ntBASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Gm21045-201ENSMUST00000183058 1020 ntBASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 V1rg10-201ENSMUST00000183378 937 ntBASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Gm27568-201ENSMUST00000184220 99 ntBASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Gm19637-201ENSMUST00000185933 579 ntBASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Gm29604-201ENSMUST00000187176 163 ntBASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Gm43899-201ENSMUST00000203675 246 ntBASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Gm44478-201ENSMUST00000204875 114 ntBASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 AC154600.1-201ENSMUST00000226480 714 ntBASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Gm4945-201ENSMUST00000075152 453 ntBASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Gm23447-201ENSMUST00000082798 163 ntBASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Trav3-1Q5R1I8 Gm43879-201ENSMUST00000203811 3760 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm14404-201ENSMUST00000119117 1660 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Mir19b-1-201ENSMUST00000102301 87 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm24715-201ENSMUST00000102377 95 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm24281-201ENSMUST00000104234 136 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm14894-201ENSMUST00000117170 270 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm13451-201ENSMUST00000117649 592 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm25321-201ENSMUST00000122558 102 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm25270-201ENSMUST00000122606 138 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm23667-201ENSMUST00000157466 120 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm22651-201ENSMUST00000157872 94 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm24961-201ENSMUST00000157918 184 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm23666-201ENSMUST00000158053 116 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm17075-201ENSMUST00000171924 670 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm27960-201ENSMUST00000183445 184 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Mir6413-201ENSMUST00000184049 108 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm28061-201ENSMUST00000189085 807 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm28951-201ENSMUST00000190742 313 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm37449-201ENSMUST00000193016 270 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm32033-201ENSMUST00000193483 339 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm18658-201ENSMUST00000195558 270 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm44818-201ENSMUST00000206608 358 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 CT030194.2-201ENSMUST00000225752 379 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm9762-201ENSMUST00000036976 444 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm25796-201ENSMUST00000082645 163 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Mir26a-2-201ENSMUST00000083496 84 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Mir342-201ENSMUST00000083502 99 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 AC154481.2-201ENSMUST00000222526 3175 ntBASIC1.87□□□□□ -2.11
Trav3-1Q5R1I8 Gm6215-201ENSMUST00000119297 1386 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Gm6545-201ENSMUST00000217186 1786 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Gm8569-201ENSMUST00000117630 647 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Gm13537-201ENSMUST00000120467 267 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Gm25339-201ENSMUST00000157458 232 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Gm22889-201ENSMUST00000158639 58 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Gm24343-201ENSMUST00000158708 111 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Gm16571-201ENSMUST00000159112 291 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Gm3076-201ENSMUST00000161613 451 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Gm6788-201ENSMUST00000166459 270 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Gm17183-201ENSMUST00000171170 493 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Trav3-1Q5R1I8 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms