Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 Mir6363-201ENSMUST00000184880 114 ntBASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 Gm19641-201ENSMUST00000188432 417 ntBASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 Gm29262-201ENSMUST00000190084 196 ntBASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 Gm43739-201ENSMUST00000198294 307 ntBASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 Gm44214-201ENSMUST00000204153 606 ntBASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 Gm23455-201ENSMUST00000083331 100 ntBASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 Tlr6-201ENSMUST00000062315 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 Gm43793-201ENSMUST00000201645 1333 ntBASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Rnf43Q5NCP0 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Gm24235-201ENSMUST00000104319 129 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Gm23608-201ENSMUST00000104545 128 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Gm13880-201ENSMUST00000118421 474 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Gm15195-201ENSMUST00000118775 263 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Gm6584-201ENSMUST00000119671 447 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Gm9043-201ENSMUST00000119677 314 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Gm14101-201ENSMUST00000121502 473 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Gm23837-201ENSMUST00000122656 286 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Gm16220-201ENSMUST00000131874 405 ntTSL 3 BASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Gm8289-201ENSMUST00000144814 1182 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Gm23078-201ENSMUST00000157848 148 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Gm26430-201ENSMUST00000178054 107 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Gm26180-201ENSMUST00000179942 107 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Gm27690-201ENSMUST00000184596 126 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Gm20056-201ENSMUST00000194813 519 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Mir7227-201ENSMUST00000200408 59 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Gm44757-201ENSMUST00000206373 157 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 AC122393.3-201ENSMUST00000226343 1059 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Gm26447-201ENSMUST00000082448 129 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Gm26228-201ENSMUST00000082512 107 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Gm25080-201ENSMUST00000082526 107 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Gm25518-201ENSMUST00000083864 107 ntBASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Mageb16-202ENSMUST00000114016 1725 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Rnf43Q5NCP0 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 AC103672.3-201ENSMUST00000227649 3243 ntBASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 AC152981.1-201ENSMUST00000218320 2480 ntBASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Gm25595-201ENSMUST00000102273 97 ntBASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Gm11313-201ENSMUST00000118779 432 ntBASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Gm7840-201ENSMUST00000122086 533 ntBASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Gm24504-201ENSMUST00000157679 100 ntBASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Gm26034-201ENSMUST00000158154 116 ntBASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Gm22852-201ENSMUST00000177899 101 ntBASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Gm43407-201ENSMUST00000199816 317 ntBASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 AC147633.1-201ENSMUST00000225134 259 ntBASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 AC123656.2-201ENSMUST00000226726 227 ntBASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Slc19a3-201ENSMUST00000045560 2974 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Gm24457-201ENSMUST00000083196 105 ntBASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Olfr713-201ENSMUST00000098139 975 ntBASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Gm6043-201ENSMUST00000099961 492 ntBASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Rnf43Q5NCP0 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms