Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Trim58Q5NCC9 Gm7634-201ENSMUST00000185778 553 ntBASIC3.91□□□□□ -1.78
Trim58Q5NCC9 Gm28917-201ENSMUST00000187294 237 ntBASIC3.91□□□□□ -1.78
Trim58Q5NCC9 Gm28766-201ENSMUST00000191086 234 ntBASIC3.91□□□□□ -1.78
Trim58Q5NCC9 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Trim58Q5NCC9 Ighv1-41-201ENSMUST00000194414 329 ntBASIC3.91□□□□□ -1.78
Trim58Q5NCC9 Gm37709-201ENSMUST00000195074 600 ntBASIC3.91□□□□□ -1.78
Trim58Q5NCC9 Gm43814-201ENSMUST00000197851 413 ntBASIC3.91□□□□□ -1.78
Trim58Q5NCC9 Gm19126-201ENSMUST00000207896 509 ntBASIC3.91□□□□□ -1.78
Trim58Q5NCC9 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Trim58Q5NCC9 AC167013.2-202ENSMUST00000227035 333 ntBASIC3.91□□□□□ -1.78
Trim58Q5NCC9 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Trim58Q5NCC9 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Trim58Q5NCC9 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Trim58Q5NCC9 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Trim58Q5NCC9 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Trim58Q5NCC9 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Trim58Q5NCC9 Gm45033-201ENSMUST00000206710 3167 ntBASIC3.91□□□□□ -1.78
Trim58Q5NCC9 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Trim58Q5NCC9 Gm21379-201ENSMUST00000179772 1955 ntBASIC3.91□□□□□ -1.78
Trim58Q5NCC9 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Trim58Q5NCC9 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
Trim58Q5NCC9 Gm45263-201ENSMUST00000210377 1375 ntBASIC3.9□□□□□ -1.78
Trim58Q5NCC9 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
Trim58Q5NCC9 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Trim58Q5NCC9 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Trim58Q5NCC9 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Trim58Q5NCC9 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Trim58Q5NCC9 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm24118-201ENSMUST00000103972 126 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm22590-201ENSMUST00000104247 128 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm15988-201ENSMUST00000118677 367 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm14534-201ENSMUST00000120045 357 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm16373-201ENSMUST00000129517 303 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm15733-201ENSMUST00000132957 242 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm16147-201ENSMUST00000162143 373 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm21842-201ENSMUST00000177552 498 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm21626-201ENSMUST00000177791 498 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm21562-201ENSMUST00000177888 498 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm21539-201ENSMUST00000177925 498 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm17522-201ENSMUST00000178144 498 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm21599-201ENSMUST00000178249 498 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm21914-201ENSMUST00000178452 498 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm21723-201ENSMUST00000178692 498 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm21916-201ENSMUST00000178771 498 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm21801-201ENSMUST00000178865 498 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm21633-201ENSMUST00000178941 498 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm17412-201ENSMUST00000179261 468 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm21821-201ENSMUST00000179646 498 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm21588-201ENSMUST00000180074 498 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm21780-201ENSMUST00000180128 498 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm21572-201ENSMUST00000180134 498 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm21529-201ENSMUST00000180175 498 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Mir6907-201ENSMUST00000183764 71 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm29370-202ENSMUST00000187476 499 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm9775-201ENSMUST00000189402 331 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm36776-201ENSMUST00000207006 203 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 AC151843.1-201ENSMUST00000215960 691 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.9□□□□□ -1.79
Trim58Q5NCC9 AC153646.1-201ENSMUST00000223229 1279 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 CT009733.1-201ENSMUST00000225322 425 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm7869-201ENSMUST00000121457 1322 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.9□□□□□ -1.79
Trim58Q5NCC9 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Trim58Q5NCC9 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.89□□□□□ -1.79
Trim58Q5NCC9 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim58Q5NCC9 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.89□□□□□ -1.79
Trim58Q5NCC9 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Trim58Q5NCC9 Gm23609-201ENSMUST00000104542 127 ntBASIC3.89□□□□□ -1.79
Trim58Q5NCC9 Gm15148-201ENSMUST00000117602 156 ntBASIC3.89□□□□□ -1.79
Trim58Q5NCC9 Gm12656-201ENSMUST00000118149 577 ntBASIC3.89□□□□□ -1.79
Trim58Q5NCC9 Gm15854-201ENSMUST00000118879 808 ntBASIC3.89□□□□□ -1.79
Trim58Q5NCC9 Gm14986-201ENSMUST00000121262 1002 ntBASIC3.89□□□□□ -1.79
Trim58Q5NCC9 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC3.89□□□□□ -1.79
Trim58Q5NCC9 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Trim58Q5NCC9 Gm22818-201ENSMUST00000157446 104 ntBASIC3.89□□□□□ -1.79
Trim58Q5NCC9 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.89□□□□□ -1.79
Trim58Q5NCC9 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Trim58Q5NCC9 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.89□□□□□ -1.79
Trim58Q5NCC9 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.89□□□□□ -1.79
Trim58Q5NCC9 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC3.89□□□□□ -1.79
Trim58Q5NCC9 Gm4859-201ENSMUST00000199625 787 ntBASIC3.89□□□□□ -1.79
Trim58Q5NCC9 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms