Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC4.48□□□□□ -1.69
Ccdc88bQ4QRL3 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC4.48□□□□□ -1.69
Ccdc88bQ4QRL3 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC4.48□□□□□ -1.69
Ccdc88bQ4QRL3 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC4.48□□□□□ -1.69
Ccdc88bQ4QRL3 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Ccdc88bQ4QRL3 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Ccdc88bQ4QRL3 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC4.47□□□□□ -1.69
Ccdc88bQ4QRL3 Gm6796-201ENSMUST00000211919 243 ntBASIC4.47□□□□□ -1.69
Ccdc88bQ4QRL3 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC4.47□□□□□ -1.69
Ccdc88bQ4QRL3 AC139845.2-201ENSMUST00000227504 436 ntBASIC4.47□□□□□ -1.69
Ccdc88bQ4QRL3 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Ccdc88bQ4QRL3 Gm26458-201ENSMUST00000082832 128 ntBASIC4.47□□□□□ -1.69
Ccdc88bQ4QRL3 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Ccdc88bQ4QRL3 Gm8744-201ENSMUST00000204475 3581 ntBASIC4.47□□□□□ -1.69
Ccdc88bQ4QRL3 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Ccdc88bQ4QRL3 Gm5384-201ENSMUST00000120313 463 ntBASIC4.46□□□□□ -1.7
Ccdc88bQ4QRL3 Gm24876-201ENSMUST00000158780 92 ntBASIC4.46□□□□□ -1.7
Ccdc88bQ4QRL3 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC4.46□□□□□ -1.7
Ccdc88bQ4QRL3 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Ccdc88bQ4QRL3 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Ccdc88bQ4QRL3 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC4.46□□□□□ -1.7
Ccdc88bQ4QRL3 Gm43704-201ENSMUST00000196164 496 ntBASIC4.46□□□□□ -1.7
Ccdc88bQ4QRL3 Gm7117-201ENSMUST00000071515 387 ntBASIC4.46□□□□□ -1.7
Ccdc88bQ4QRL3 Gm37296-201ENSMUST00000192728 2922 ntBASIC4.46□□□□□ -1.7
Ccdc88bQ4QRL3 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Ccdc88bQ4QRL3 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
Ccdc88bQ4QRL3 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Ccdc88bQ4QRL3 Gm37703-201ENSMUST00000192292 1784 ntBASIC4.45□□□□□ -1.7
Ccdc88bQ4QRL3 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC4.45□□□□□ -1.7
Ccdc88bQ4QRL3 Gm38166-201ENSMUST00000191660 471 ntBASIC4.45□□□□□ -1.7
Ccdc88bQ4QRL3 Gm37989-201ENSMUST00000195202 803 ntBASIC4.45□□□□□ -1.7
Ccdc88bQ4QRL3 Gm18327-201ENSMUST00000202426 830 ntBASIC4.45□□□□□ -1.7
Ccdc88bQ4QRL3 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Ccdc88bQ4QRL3 AC160958.1-201ENSMUST00000224833 368 ntBASIC4.45□□□□□ -1.7
Ccdc88bQ4QRL3 AC154184.2-201ENSMUST00000225335 349 ntBASIC4.45□□□□□ -1.7
Ccdc88bQ4QRL3 Gm42841-201ENSMUST00000199806 1932 ntBASIC4.45□□□□□ -1.7
Ccdc88bQ4QRL3 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Ccdc88bQ4QRL3 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Ccdc88bQ4QRL3 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC4.44□□□□□ -1.7
Ccdc88bQ4QRL3 Gm37377-201ENSMUST00000191733 304 ntBASIC4.44□□□□□ -1.7
Ccdc88bQ4QRL3 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Ccdc88bQ4QRL3 Gm34091-201ENSMUST00000200875 604 ntBASIC4.44□□□□□ -1.7
Ccdc88bQ4QRL3 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC4.44□□□□□ -1.7
Ccdc88bQ4QRL3 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC4.44□□□□□ -1.7
Ccdc88bQ4QRL3 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Ccdc88bQ4QRL3 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC4.44□□□□□ -1.7
Ccdc88bQ4QRL3 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Gm6321-201ENSMUST00000194460 1090 ntBASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 AC152979.1-201ENSMUST00000218214 289 ntBASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Gm18026-201ENSMUST00000222789 727 ntBASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Gm14655-201ENSMUST00000120124 578 ntBASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Gm15225-201ENSMUST00000120449 1017 ntBASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Gm23670-201ENSMUST00000157469 119 ntBASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Gm22730-201ENSMUST00000158085 171 ntBASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Gm9251-201ENSMUST00000197202 628 ntBASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Gm45551-201ENSMUST00000211459 928 ntBASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Mir26a-1-201ENSMUST00000083579 90 ntBASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Mir127-201ENSMUST00000093568 70 ntBASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Ccdc88bQ4QRL3 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Ccdc88bQ4QRL3 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Ccdc88bQ4QRL3 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Ccdc88bQ4QRL3 Gm13439-201ENSMUST00000117541 409 ntBASIC4.42□□□□□ -1.7
Ccdc88bQ4QRL3 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC4.42□□□□□ -1.7
Ccdc88bQ4QRL3 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC4.42□□□□□ -1.7
Ccdc88bQ4QRL3 Gm24082-201ENSMUST00000175175 83 ntBASIC4.42□□□□□ -1.7
Ccdc88bQ4QRL3 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Ccdc88bQ4QRL3 Mir7026-201ENSMUST00000184384 67 ntBASIC4.42□□□□□ -1.7
Ccdc88bQ4QRL3 Gm37866-201ENSMUST00000191950 696 ntBASIC4.42□□□□□ -1.7
Ccdc88bQ4QRL3 Gm18193-201ENSMUST00000210017 772 ntBASIC4.42□□□□□ -1.7
Ccdc88bQ4QRL3 Olfr1174-ps-201ENSMUST00000213348 1738 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Ccdc88bQ4QRL3 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Ccdc88bQ4QRL3 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Ccdc88bQ4QRL3 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Ccdc88bQ4QRL3 Mir682-201ENSMUST00000102281 96 ntBASIC4.41□□□□□ -1.7
Ccdc88bQ4QRL3 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Ccdc88bQ4QRL3 Gm27796-201ENSMUST00000183863 261 ntBASIC4.41□□□□□ -1.7
Ccdc88bQ4QRL3 Gm42539-201ENSMUST00000197009 308 ntBASIC4.41□□□□□ -1.7
Ccdc88bQ4QRL3 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Ccdc88bQ4QRL3 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
Ccdc88bQ4QRL3 Gm23551-201ENSMUST00000116852 121 ntBASIC4.4□□□□□ -1.71
Ccdc88bQ4QRL3 Gm12954-201ENSMUST00000118610 611 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 104.9 ms