Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Ddb1Q3U1J4 Vmn1r10-202ENSMUST00000228270 2084 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm37777-201ENSMUST00000195546 3366 ntBASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm38104-201ENSMUST00000195121 1895 ntBASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm13728-201ENSMUST00000117471 400 ntBASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm14517-201ENSMUST00000119040 337 ntBASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm13787-201ENSMUST00000120422 168 ntBASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm11216-201ENSMUST00000125240 354 ntTSL 5 BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Mir1934-201ENSMUST00000158127 83 ntBASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm18588-201ENSMUST00000177308 492 ntBASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm5527-201ENSMUST00000179821 642 ntBASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm19427-201ENSMUST00000183619 208 ntBASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Mir6993-201ENSMUST00000184912 65 ntBASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm28343-201ENSMUST00000185386 112 ntBASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm29299-201ENSMUST00000185609 923 ntBASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm28474-201ENSMUST00000188501 315 ntBASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm29573-201ENSMUST00000190291 919 ntBASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm37617-201ENSMUST00000194309 159 ntBASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm43224-201ENSMUST00000201567 898 ntBASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 AC167977.1-201ENSMUST00000221384 234 ntBASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm26439-201ENSMUST00000082592 106 ntBASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Gm22287-201ENSMUST00000083197 107 ntBASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Olfr1226-206ENSMUST00000217601 2670 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Ddb1Q3U1J4 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Gm14404-201ENSMUST00000119117 1660 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Mir147-201ENSMUST00000102354 79 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Mir673-201ENSMUST00000102361 91 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Gm14125-201ENSMUST00000113442 680 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Gm14751-201ENSMUST00000117693 222 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Gm14607-201ENSMUST00000119119 491 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Gm11598-201ENSMUST00000119257 357 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Gm12935-201ENSMUST00000119352 246 ntBASIC5.13□□□□□ -1.59
Ddb1Q3U1J4 Gm15379-201ENSMUST00000121224 648 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms