Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Gm22497-201ENSMUST00000104499 131 ntBASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Gm6274-201ENSMUST00000118173 797 ntBASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Gm8289-201ENSMUST00000144814 1182 ntBASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Gm26100-201ENSMUST00000157245 127 ntBASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Gm25341-201ENSMUST00000157461 268 ntBASIC3.32□□□□□ -1.88
Trim43aQ3TL54 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Gm4479-201ENSMUST00000178807 171 ntBASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Gm27796-201ENSMUST00000183863 261 ntBASIC3.32□□□□□ -1.88
Trim43aQ3TL54 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Gm18193-201ENSMUST00000210017 772 ntBASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.32□□□□□ -1.88
Trim43aQ3TL54 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC3.32□□□□□ -1.88
Trim43aQ3TL54 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim43aQ3TL54 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Gm10088-201ENSMUST00000074116 423 ntBASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Gm25005-201ENSMUST00000083812 156 ntBASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Gm7739-201ENSMUST00000221131 1560 ntBASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim43aQ3TL54 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
Trim43aQ3TL54 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Trim43aQ3TL54 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.31□□□□□ -1.88
Trim43aQ3TL54 Gm6300-201ENSMUST00000192393 1498 ntBASIC3.31□□□□□ -1.88
Trim43aQ3TL54 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trim43aQ3TL54 Gm22115-201ENSMUST00000103976 133 ntBASIC3.31□□□□□ -1.88
Trim43aQ3TL54 Gm23923-201ENSMUST00000104108 133 ntBASIC3.31□□□□□ -1.88
Trim43aQ3TL54 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trim43aQ3TL54 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trim43aQ3TL54 Gm13761-201ENSMUST00000117238 807 ntBASIC3.31□□□□□ -1.88
Trim43aQ3TL54 Gm12230-201ENSMUST00000118301 454 ntBASIC3.31□□□□□ -1.88
Trim43aQ3TL54 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Trim43aQ3TL54 Gm15344-201ENSMUST00000152600 421 ntTSL 3 BASIC3.31□□□□□ -1.88
Trim43aQ3TL54 Gm24720-201ENSMUST00000157518 166 ntBASIC3.31□□□□□ -1.88
Trim43aQ3TL54 Gm28591-201ENSMUST00000185259 183 ntBASIC3.31□□□□□ -1.88
Trim43aQ3TL54 Gm18747-201ENSMUST00000198129 648 ntBASIC3.31□□□□□ -1.88
Trim43aQ3TL54 Gm43217-201ENSMUST00000199513 367 ntBASIC3.31□□□□□ -1.88
Trim43aQ3TL54 Gm43124-201ENSMUST00000201878 278 ntBASIC3.31□□□□□ -1.88
Trim43aQ3TL54 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Trim43aQ3TL54 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.31□□□□□ -1.88
Trim43aQ3TL54 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.31□□□□□ -1.88
Trim43aQ3TL54 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Trim43aQ3TL54 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Trim43aQ3TL54 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Trim43aQ3TL54 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.31□□□□□ -1.88
Trim43aQ3TL54 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.31□□□□□ -1.88
Trim43aQ3TL54 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Gm23175-201ENSMUST00000104371 132 ntBASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Gm26254-201ENSMUST00000122491 118 ntBASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Gm20773-201ENSMUST00000178940 681 ntBASIC3.3□□□□□ -1.88
Trim43aQ3TL54 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Gm7909-201ENSMUST00000182688 614 ntBASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Gm27374-201ENSMUST00000183660 81 ntBASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Gm38329-201ENSMUST00000193473 427 ntBASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Ighv1-41-201ENSMUST00000194414 329 ntBASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Gm44084-201ENSMUST00000203947 409 ntBASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Gm18597-201ENSMUST00000209519 694 ntBASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Gm7540-201ENSMUST00000219764 926 ntBASIC3.3□□□□□ -1.88
Trim43aQ3TL54 AC151730.2-201ENSMUST00000224027 475 ntBASIC3.3□□□□□ -1.88
Trim43aQ3TL54 CT030254.3-201ENSMUST00000225959 1231 ntBASIC3.3□□□□□ -1.88
Trim43aQ3TL54 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.3□□□□□ -1.88
Trim43aQ3TL54 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Gm24533-201ENSMUST00000083138 196 ntBASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Trim43aQ3TL54 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim43aQ3TL54 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trim43aQ3TL54 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.29□□□□□ -1.88
Trim43aQ3TL54 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Trim43aQ3TL54 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim43aQ3TL54 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.29□□□□□ -1.88
Trim43aQ3TL54 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Trim43aQ3TL54 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trim43aQ3TL54 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Trim43aQ3TL54 Gm12587-201ENSMUST00000120180 427 ntBASIC3.29□□□□□ -1.88
Trim43aQ3TL54 Gm16274-201ENSMUST00000139251 592 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms