Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm6012-201ENSMUST00000210821 730 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm45651-201ENSMUST00000210857 335 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm17989-201ENSMUST00000211543 412 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col8a1Q00780 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col8a1Q00780 AC133156.1-202ENSMUST00000227284 363 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm37509-201ENSMUST00000194867 3169 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col8a1Q00780 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col8a1Q00780 AC125532.1-201ENSMUST00000216210 2334 ntBASIC4.27□□□□□ -1.73
Col8a1Q00780 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Col8a1Q00780 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col8a1Q00780 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col8a1Q00780 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Col8a1Q00780 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Col8a1Q00780 Gm43333-201ENSMUST00000198340 2262 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col8a1Q00780 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Col8a1Q00780 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col8a1Q00780 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm7529-201ENSMUST00000213753 1897 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col8a1Q00780 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col8a1Q00780 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col8a1Q00780 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col8a1Q00780 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col8a1Q00780 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm42955-201ENSMUST00000197355 3393 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm25879-201ENSMUST00000104330 107 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 Mir292-201ENSMUST00000104847 82 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm11970-201ENSMUST00000116105 320 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm15752-201ENSMUST00000117427 394 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm13363-201ENSMUST00000122008 522 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm14578-201ENSMUST00000122166 391 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm22613-201ENSMUST00000122679 292 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC4.26□□□□□ -1.73
Col8a1Q00780 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm26102-201ENSMUST00000157251 284 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 Mir5099-201ENSMUST00000175257 74 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm20698-201ENSMUST00000175657 233 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm23660-201ENSMUST00000178362 79 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm24088-201ENSMUST00000179100 79 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm19131-201ENSMUST00000203408 789 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm44336-201ENSMUST00000203696 468 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm44765-201ENSMUST00000206927 601 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm44820-201ENSMUST00000207420 396 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col8a1Q00780 CT010455.1-201ENSMUST00000218579 413 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 AC160931.2-201ENSMUST00000221445 351 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.26□□□□□ -1.73
Col8a1Q00780 AC125484.1-201ENSMUST00000223218 234 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 AC154305.3-201ENSMUST00000224661 552 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 AC141884.1-201ENSMUST00000226327 636 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 AC156790.5-201ENSMUST00000227075 231 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col8a1Q00780 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col8a1Q00780 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Col8a1Q00780 n-R5s205-201ENSMUST00000083149 125 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm25937-201ENSMUST00000083912 107 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm44027-201ENSMUST00000203419 3480 ntBASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col8a1Q00780 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.26□□□□□ -1.73
Col8a1Q00780 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col8a1Q00780 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Col8a1Q00780 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col8a1Q00780 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Col8a1Q00780 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Col8a1Q00780 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col8a1Q00780 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC4.26□□□□□ -1.73
Col8a1Q00780 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Col8a1Q00780 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
Col8a1Q00780 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Col8a1Q00780 Gm37018-201ENSMUST00000192441 3869 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Col8a1Q00780 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
Col8a1Q00780 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Col8a1Q00780 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col8a1Q00780 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Col8a1Q00780 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC4.25□□□□□ -1.73
Col8a1Q00780 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
Col8a1Q00780 Gm12871-201ENSMUST00000118758 438 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 Gm13009-201ENSMUST00000121307 267 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Col8a1Q00780 Gm8289-201ENSMUST00000144814 1182 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 Gm23169-201ENSMUST00000157157 112 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 Gm23350-201ENSMUST00000158429 103 ntBASIC4.25□□□□□ -1.73
Col8a1Q00780 Gm25643-201ENSMUST00000158874 103 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms