Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm24636-201ENSMUST00000158673 288 ntBASIC4.65□□□□□ -1.67
Shmt1P50431 Gm16566-201ENSMUST00000160387 910 ntBASIC4.65□□□□□ -1.67
Shmt1P50431 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC4.65□□□□□ -1.67
Shmt1P50431 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Shmt1P50431 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Shmt1P50431 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.65□□□□□ -1.67
Shmt1P50431 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.65□□□□□ -1.67
Shmt1P50431 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Shmt1P50431 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Shmt1P50431 Gm37658-201ENSMUST00000192672 315 ntBASIC4.65□□□□□ -1.67
Shmt1P50431 Gm43604-201ENSMUST00000199799 705 ntBASIC4.65□□□□□ -1.67
Shmt1P50431 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Shmt1P50431 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.65□□□□□ -1.67
Shmt1P50431 Gm5876-201ENSMUST00000203735 243 ntBASIC4.65□□□□□ -1.67
Shmt1P50431 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.65□□□□□ -1.67
Shmt1P50431 AC162387.1-201ENSMUST00000213369 213 ntBASIC4.65□□□□□ -1.67
Shmt1P50431 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.65□□□□□ -1.67
Shmt1P50431 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC4.65□□□□□ -1.67
Shmt1P50431 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.65□□□□□ -1.67
Shmt1P50431 Gm7093-201ENSMUST00000223004 581 ntBASIC4.65□□□□□ -1.67
Shmt1P50431 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.65□□□□□ -1.67
Shmt1P50431 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Shmt1P50431 Gm23928-201ENSMUST00000082469 145 ntBASIC4.65□□□□□ -1.67
Shmt1P50431 Gm24460-201ENSMUST00000082731 106 ntBASIC4.65□□□□□ -1.67
Shmt1P50431 Gm26206-201ENSMUST00000082908 110 ntBASIC4.65□□□□□ -1.67
Shmt1P50431 Gm24522-201ENSMUST00000083964 108 ntBASIC4.65□□□□□ -1.67
Shmt1P50431 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Shmt1P50431 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
Shmt1P50431 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Shmt1P50431 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Shmt1P50431 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Shmt1P50431 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Shmt1P50431 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Shmt1P50431 Olfr1387-202ENSMUST00000214541 4840 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Shmt1P50431 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.65□□□□□ -1.67
Shmt1P50431 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.65□□□□□ -1.67
Shmt1P50431 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Shmt1P50431 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Shmt1P50431 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.65□□□□□ -1.67
Shmt1P50431 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.65□□□□□ -1.67
Shmt1P50431 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Shmt1P50431 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Shmt1P50431 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Shmt1P50431 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Shmt1P50431 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
Shmt1P50431 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
Shmt1P50431 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Shmt1P50431 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Shmt1P50431 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Shmt1P50431 Mir759-201ENSMUST00000103254 98 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Gm23424-201ENSMUST00000103889 110 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Shmt1P50431 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Shmt1P50431 Gm14385-201ENSMUST00000116315 876 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Gm13331-201ENSMUST00000117500 448 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Gm11219-201ENSMUST00000118565 358 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Gm15988-201ENSMUST00000118677 367 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Gm23789-201ENSMUST00000122536 301 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.64□□□□□ -1.67
Shmt1P50431 Gm5963-201ENSMUST00000143451 236 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Gm22563-201ENSMUST00000157333 269 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Shmt1P50431 Gm26177-201ENSMUST00000178683 107 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Gm21816-201ENSMUST00000179255 360 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Gm26988-201ENSMUST00000183296 945 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Mir6401-201ENSMUST00000184499 109 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Gm28666-201ENSMUST00000186649 274 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Gm28967-201ENSMUST00000187351 281 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.64□□□□□ -1.67
Shmt1P50431 Gm36984-201ENSMUST00000192770 235 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Mir6375-201ENSMUST00000197176 95 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Gm43941-201ENSMUST00000203303 1073 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Gm43976-201ENSMUST00000203637 235 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Gm44687-201ENSMUST00000204975 235 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Gm18306-201ENSMUST00000207338 569 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.64□□□□□ -1.67
Shmt1P50431 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 AC154305.1-201ENSMUST00000224443 450 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 AC109172.1-201ENSMUST00000227503 187 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Shmt1P50431 Mir181a-2-201ENSMUST00000083489 76 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Snord38a-201ENSMUST00000083746 71 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Shmt1P50431 Gm43443-201ENSMUST00000202337 2393 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Shmt1P50431 Gm37668-201ENSMUST00000193745 1944 ntBASIC4.64□□□□□ -1.67
Shmt1P50431 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Shmt1P50431 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Shmt1P50431 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Shmt1P50431 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Shmt1P50431 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Shmt1P50431 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Shmt1P50431 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Shmt1P50431 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Shmt1P50431 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Shmt1P50431 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Shmt1P50431 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms