Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Rfx1P48377 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.76□□□□□ -1.49
Rfx1P48377 Gm11507-201ENSMUST00000156462 412 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 Gm23411-201ENSMUST00000157988 62 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 Gm6264-202ENSMUST00000162896 1217 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 Mir5098-201ENSMUST00000175320 82 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 Gm25671-201ENSMUST00000178612 105 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 Gm23307-201ENSMUST00000179167 105 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 Gm25286-201ENSMUST00000179790 105 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 Gm38167-201ENSMUST00000195704 1178 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 Gm8929-201ENSMUST00000197781 1132 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 Gm33952-201ENSMUST00000197795 408 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 Gm29781-201ENSMUST00000203862 478 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 Gm44795-201ENSMUST00000205496 319 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC5.76□□□□□ -1.49
Rfx1P48377 AC158525.1-201ENSMUST00000223806 576 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rfx1P48377 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rfx1P48377 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Rfx1P48377 Gm23972-201ENSMUST00000083322 165 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rfx1P48377 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Rfx1P48377 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Rfx1P48377 Gm15304-201ENSMUST00000122150 2640 ntBASIC5.76□□□□□ -1.49
Rfx1P48377 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Rfx1P48377 Gm38260-201ENSMUST00000193573 3995 ntBASIC5.75□□□□□ -1.49
Rfx1P48377 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Rfx1P48377 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Rfx1P48377 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Rfx1P48377 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.75□□□□□ -1.49
Rfx1P48377 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC5.75□□□□□ -1.49
Rfx1P48377 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.75□□□□□ -1.49
Rfx1P48377 Mir690-201ENSMUST00000102110 109 ntBASIC5.75□□□□□ -1.49
Rfx1P48377 Gm23193-201ENSMUST00000102427 82 ntBASIC5.75□□□□□ -1.49
Rfx1P48377 Gm12901-201ENSMUST00000118690 532 ntBASIC5.75□□□□□ -1.49
Rfx1P48377 Gm8217-201ENSMUST00000119136 465 ntBASIC5.75□□□□□ -1.49
Rfx1P48377 Gm14046-201ENSMUST00000119389 509 ntBASIC5.75□□□□□ -1.49
Rfx1P48377 Gm15493-201ENSMUST00000119461 528 ntBASIC5.75□□□□□ -1.49
Rfx1P48377 Gm14516-201ENSMUST00000120012 252 ntBASIC5.75□□□□□ -1.49
Rfx1P48377 Gm12640-201ENSMUST00000120097 310 ntBASIC5.75□□□□□ -1.49
Rfx1P48377 Gm11849-201ENSMUST00000121293 261 ntBASIC5.75□□□□□ -1.49
Rfx1P48377 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC5.75□□□□□ -1.49
Rfx1P48377 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC5.75□□□□□ -1.49
Rfx1P48377 Gm22383-201ENSMUST00000158188 327 ntBASIC5.75□□□□□ -1.49
Rfx1P48377 Gm24931-201ENSMUST00000158324 107 ntBASIC5.75□□□□□ -1.49
Rfx1P48377 Gm26430-201ENSMUST00000178054 107 ntBASIC5.75□□□□□ -1.49
Rfx1P48377 Gm28883-201ENSMUST00000189256 369 ntBASIC5.75□□□□□ -1.49
Rfx1P48377 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC5.75□□□□□ -1.49
Rfx1P48377 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.75□□□□□ -1.49
Rfx1P48377 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC5.75□□□□□ -1.49
Rfx1P48377 Gm18320-201ENSMUST00000211304 595 ntBASIC5.75□□□□□ -1.49
Rfx1P48377 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
Rfx1P48377 AL450317.1-201ENSMUST00000213941 291 ntBASIC5.75□□□□□ -1.49
Rfx1P48377 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Rfx1P48377 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Rfx1P48377 Gm23302-201ENSMUST00000082710 100 ntBASIC5.75□□□□□ -1.49
Rfx1P48377 Gm5670-201ENSMUST00000093546 372 ntBASIC5.75□□□□□ -1.49
Rfx1P48377 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
Rfx1P48377 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Rfx1P48377 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Rfx1P48377 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Rfx1P48377 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Rfx1P48377 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC5.75□□□□□ -1.49
Rfx1P48377 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Rfx1P48377 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Rfx1P48377 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Rfx1P48377 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Rfx1P48377 AC160931.3-201ENSMUST00000222111 2267 ntBASIC5.74□□□□□ -1.49
Rfx1P48377 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Rfx1P48377 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Rfx1P48377 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Rfx1P48377 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC5.74□□□□□ -1.49
Rfx1P48377 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Rfx1P48377 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Rfx1P48377 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Rfx1P48377 Olfr129-202ENSMUST00000216476 5275 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
Rfx1P48377 Gm24608-201ENSMUST00000104381 136 ntBASIC5.74□□□□□ -1.49
Rfx1P48377 Mir669g-201ENSMUST00000116809 123 ntBASIC5.74□□□□□ -1.49
Rfx1P48377 Gm12156-201ENSMUST00000119188 554 ntBASIC5.74□□□□□ -1.49
Rfx1P48377 Gm15364-201ENSMUST00000119618 585 ntBASIC5.74□□□□□ -1.49
Rfx1P48377 Gm11582-201ENSMUST00000121041 236 ntBASIC5.74□□□□□ -1.49
Rfx1P48377 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC5.74□□□□□ -1.49
Rfx1P48377 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC5.74□□□□□ -1.49
Rfx1P48377 Gm24780-201ENSMUST00000157635 143 ntBASIC5.74□□□□□ -1.49
Rfx1P48377 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC5.74□□□□□ -1.49
Rfx1P48377 Gm21726-201ENSMUST00000179654 392 ntBASIC5.74□□□□□ -1.49
Rfx1P48377 Gm26866-201ENSMUST00000180414 802 ntBASIC5.74□□□□□ -1.49
Rfx1P48377 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.74□□□□□ -1.49
Rfx1P48377 Gm4842-201ENSMUST00000183237 835 ntBASIC5.74□□□□□ -1.49
Rfx1P48377 Gm38080-201ENSMUST00000194035 268 ntBASIC5.74□□□□□ -1.49
Rfx1P48377 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC5.74□□□□□ -1.49
Rfx1P48377 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Rfx1P48377 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC5.74□□□□□ -1.49
Rfx1P48377 Gm46193-201ENSMUST00000219399 364 ntBASIC5.74□□□□□ -1.49
Rfx1P48377 AC121966.1-201ENSMUST00000221458 282 ntBASIC5.74□□□□□ -1.49
Rfx1P48377 Gm6988-201ENSMUST00000222676 375 ntBASIC5.74□□□□□ -1.49
Rfx1P48377 AL672194.1-201ENSMUST00000224841 603 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms