Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Vmn1r89-206ENSMUST00000227319 985 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC3.75□□□□□ -1.81
Lire1P11260 Gm24871-201ENSMUST00000083099 116 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Mir34b-201ENSMUST00000083558 84 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Rnu5g-201ENSMUST00000093721 116 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Lire1P11260 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC3.75□□□□□ -1.81
Lire1P11260 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Lire1P11260 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Lire1P11260 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
Lire1P11260 Gm23271-201ENSMUST00000104052 124 ntBASIC3.74□□□□□ -1.81
Lire1P11260 Gm25420-201ENSMUST00000104216 127 ntBASIC3.74□□□□□ -1.81
Lire1P11260 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Lire1P11260 Gm14816-201ENSMUST00000117174 294 ntBASIC3.74□□□□□ -1.81
Lire1P11260 Gm11432-201ENSMUST00000117334 231 ntBASIC3.74□□□□□ -1.81
Lire1P11260 Gm16431-201ENSMUST00000117454 431 ntBASIC3.74□□□□□ -1.81
Lire1P11260 Gm12891-201ENSMUST00000119358 240 ntBASIC3.74□□□□□ -1.81
Lire1P11260 Gm14845-201ENSMUST00000121259 306 ntBASIC3.74□□□□□ -1.81
Lire1P11260 Gm12340-201ENSMUST00000121617 462 ntBASIC3.74□□□□□ -1.81
Lire1P11260 Gm8200-201ENSMUST00000122390 222 ntBASIC3.74□□□□□ -1.81
Lire1P11260 Gm14129-201ENSMUST00000122436 291 ntBASIC3.74□□□□□ -1.81
Lire1P11260 Gm22957-201ENSMUST00000122511 123 ntBASIC3.74□□□□□ -1.81
Lire1P11260 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Lire1P11260 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.74□□□□□ -1.81
Lire1P11260 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Lire1P11260 Gm3191-201ENSMUST00000167139 346 ntBASIC3.74□□□□□ -1.81
Lire1P11260 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.74□□□□□ -1.81
Lire1P11260 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Lire1P11260 Gm28439-201ENSMUST00000187714 876 ntBASIC3.74□□□□□ -1.81
Lire1P11260 Gm18547-201ENSMUST00000192439 811 ntBASIC3.74□□□□□ -1.81
Lire1P11260 Gm37288-201ENSMUST00000193963 334 ntBASIC3.74□□□□□ -1.81
Lire1P11260 Gm37732-201ENSMUST00000194377 316 ntBASIC3.74□□□□□ -1.81
Lire1P11260 Gm43853-201ENSMUST00000197162 301 ntBASIC3.74□□□□□ -1.81
Lire1P11260 Gm43855-201ENSMUST00000197462 507 ntBASIC3.74□□□□□ -1.81
Lire1P11260 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.74□□□□□ -1.81
Lire1P11260 Gm44765-201ENSMUST00000206927 601 ntBASIC3.74□□□□□ -1.81
Lire1P11260 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.74□□□□□ -1.81
Lire1P11260 Gm18377-201ENSMUST00000215141 607 ntBASIC3.74□□□□□ -1.81
Lire1P11260 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Lire1P11260 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Lire1P11260 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.74□□□□□ -1.81
Lire1P11260 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.74□□□□□ -1.81
Lire1P11260 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.74□□□□□ -1.81
Lire1P11260 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC3.74□□□□□ -1.81
Lire1P11260 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Lire1P11260 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Lire1P11260 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
Lire1P11260 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Lire1P11260 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Lire1P11260 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Lire1P11260 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Lire1P11260 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.73□□□□□ -1.81
Lire1P11260 Mir878-201ENSMUST00000104680 78 ntBASIC3.73□□□□□ -1.81
Lire1P11260 Gm5757-201ENSMUST00000117494 528 ntBASIC3.73□□□□□ -1.81
Lire1P11260 Gm12173-201ENSMUST00000117622 273 ntBASIC3.73□□□□□ -1.81
Lire1P11260 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Lire1P11260 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
Lire1P11260 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.73□□□□□ -1.81
Lire1P11260 Gm11819-201ENSMUST00000122192 372 ntBASIC3.73□□□□□ -1.81
Lire1P11260 Gm23463-201ENSMUST00000122468 99 ntBASIC3.73□□□□□ -1.81
Lire1P11260 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Lire1P11260 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Lire1P11260 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Lire1P11260 Gm20450-201ENSMUST00000173652 147 ntBASIC3.73□□□□□ -1.81
Lire1P11260 Gm23816-201ENSMUST00000179617 132 ntBASIC3.73□□□□□ -1.81
Lire1P11260 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Lire1P11260 Gm8296-201ENSMUST00000185597 524 ntBASIC3.73□□□□□ -1.81
Lire1P11260 Gm8498-201ENSMUST00000188227 974 ntBASIC3.73□□□□□ -1.81
Lire1P11260 Gm29330-201ENSMUST00000190032 699 ntBASIC3.73□□□□□ -1.81
Lire1P11260 Gm19498-201ENSMUST00000191128 331 ntBASIC3.73□□□□□ -1.81
Lire1P11260 Gm28098-201ENSMUST00000191361 699 ntBASIC3.73□□□□□ -1.81
Lire1P11260 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.73□□□□□ -1.81
Lire1P11260 Gm44946-201ENSMUST00000208425 572 ntBASIC3.73□□□□□ -1.81
Lire1P11260 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC3.73□□□□□ -1.81
Lire1P11260 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Lire1P11260 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Lire1P11260 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Lire1P11260 Olfr740-201ENSMUST00000089838 936 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Lire1P11260 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Lire1P11260 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Lire1P11260 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Lire1P11260 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
Lire1P11260 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Lire1P11260 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Lire1P11260 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
Lire1P11260 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Lire1P11260 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Lire1P11260 Gm20345-201ENSMUST00000175839 2414 ntBASIC3.72□□□□□ -1.81
Lire1P11260 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Lire1P11260 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Lire1P11260 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.72□□□□□ -1.81
Lire1P11260 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.72□□□□□ -1.81
Lire1P11260 Gm5060-201ENSMUST00000120072 599 ntBASIC3.72□□□□□ -1.81
Lire1P11260 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.72□□□□□ -1.81
Lire1P11260 Gm14600-201ENSMUST00000121032 630 ntBASIC3.72□□□□□ -1.81
Lire1P11260 Gm25104-201ENSMUST00000122476 163 ntBASIC3.72□□□□□ -1.81
Lire1P11260 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.72□□□□□ -1.81
Lire1P11260 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.72□□□□□ -1.81
Lire1P11260 Mir6345-201ENSMUST00000184286 128 ntBASIC3.72□□□□□ -1.81
Lire1P11260 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms