Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Col3a1P08121 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC4.11□□□□□ -1.75
Col3a1P08121 AC102369.1-201ENSMUST00000218415 373 ntBASIC4.11□□□□□ -1.75
Col3a1P08121 AC112274.2-201ENSMUST00000218436 170 ntBASIC4.11□□□□□ -1.75
Col3a1P08121 Gm46312-201ENSMUST00000220961 420 ntBASIC4.11□□□□□ -1.75
Col3a1P08121 AC134439.2-201ENSMUST00000221950 467 ntBASIC4.11□□□□□ -1.75
Col3a1P08121 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Col3a1P08121 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Col3a1P08121 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Col3a1P08121 Gm22043-201ENSMUST00000082993 158 ntBASIC4.11□□□□□ -1.75
Col3a1P08121 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
Col3a1P08121 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC4.11□□□□□ -1.75
Col3a1P08121 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Col3a1P08121 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Col3a1P08121 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Col3a1P08121 Gm36298-201ENSMUST00000223394 1732 ntBASIC4.11□□□□□ -1.75
Col3a1P08121 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Col3a1P08121 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Col3a1P08121 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC4.11□□□□□ -1.75
Col3a1P08121 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC4.11□□□□□ -1.75
Col3a1P08121 Gm14979-201ENSMUST00000121561 1035 ntBASIC4.11□□□□□ -1.75
Col3a1P08121 Gm12358-201ENSMUST00000121842 520 ntBASIC4.11□□□□□ -1.75
Col3a1P08121 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC4.11□□□□□ -1.75
Col3a1P08121 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Col3a1P08121 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Col3a1P08121 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC4.11□□□□□ -1.75
Col3a1P08121 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC4.11□□□□□ -1.75
Col3a1P08121 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC4.11□□□□□ -1.75
Col3a1P08121 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC4.11□□□□□ -1.75
Col3a1P08121 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC4.11□□□□□ -1.75
Col3a1P08121 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Col3a1P08121 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC4.11□□□□□ -1.75
Col3a1P08121 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC4.11□□□□□ -1.75
Col3a1P08121 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC4.11□□□□□ -1.75
Col3a1P08121 Gm28639-201ENSMUST00000191519 481 ntBASIC4.11□□□□□ -1.75
Col3a1P08121 Gm34015-201ENSMUST00000194908 451 ntBASIC4.11□□□□□ -1.75
Col3a1P08121 Gm44393-201ENSMUST00000197418 138 ntBASIC4.11□□□□□ -1.75
Col3a1P08121 Gm19104-201ENSMUST00000198392 679 ntBASIC4.11□□□□□ -1.75
Col3a1P08121 Gm43954-201ENSMUST00000204634 544 ntBASIC4.11□□□□□ -1.75
Col3a1P08121 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC4.11□□□□□ -1.75
Col3a1P08121 Gm18644-201ENSMUST00000211458 815 ntBASIC4.11□□□□□ -1.75
Col3a1P08121 AC167669.1-201ENSMUST00000224932 384 ntBASIC4.11□□□□□ -1.75
Col3a1P08121 AC166369.3-201ENSMUST00000227286 409 ntBASIC4.11□□□□□ -1.75
Col3a1P08121 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Col3a1P08121 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Col3a1P08121 Serpinb9e-201ENSMUST00000071873 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Col3a1P08121 Gm14988-201ENSMUST00000117224 1548 ntBASIC4.1□□□□□ -1.75
Col3a1P08121 Gm10997-201ENSMUST00000210294 1500 ntBASIC4.1□□□□□ -1.75
Col3a1P08121 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Col3a1P08121 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.1□□□□□ -1.75
Col3a1P08121 Gm44625-201ENSMUST00000207838 1561 ntBASIC4.1□□□□□ -1.75
Col3a1P08121 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Col3a1P08121 Gm37983-201ENSMUST00000193207 2006 ntBASIC4.1□□□□□ -1.75
Col3a1P08121 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Col3a1P08121 Gm42721-201ENSMUST00000197165 1523 ntBASIC4.1□□□□□ -1.75
Col3a1P08121 Gm11488-201ENSMUST00000117277 863 ntBASIC4.1□□□□□ -1.75
Col3a1P08121 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.1□□□□□ -1.75
Col3a1P08121 Gm14360-201ENSMUST00000120670 393 ntBASIC4.1□□□□□ -1.75
Col3a1P08121 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Col3a1P08121 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Col3a1P08121 Gm25052-201ENSMUST00000122661 158 ntBASIC4.1□□□□□ -1.75
Col3a1P08121 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC4.1□□□□□ -1.75
Col3a1P08121 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC4.1□□□□□ -1.75
Col3a1P08121 Gm23671-201ENSMUST00000157472 103 ntBASIC4.1□□□□□ -1.75
Col3a1P08121 Gm26393-201ENSMUST00000157625 129 ntBASIC4.1□□□□□ -1.75
Col3a1P08121 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC4.1□□□□□ -1.75
Col3a1P08121 Gm20832-201ENSMUST00000189076 665 ntBASIC4.1□□□□□ -1.75
Col3a1P08121 Gm30638-201ENSMUST00000195570 656 ntBASIC4.1□□□□□ -1.75
Col3a1P08121 Gm36728-201ENSMUST00000195782 665 ntBASIC4.1□□□□□ -1.75
Col3a1P08121 Gm6230-201ENSMUST00000208077 780 ntBASIC4.1□□□□□ -1.75
Col3a1P08121 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC4.1□□□□□ -1.75
Col3a1P08121 AC153564.2-201ENSMUST00000219464 273 ntBASIC4.1□□□□□ -1.75
Col3a1P08121 Gm9370-201ENSMUST00000222787 609 ntBASIC4.1□□□□□ -1.75
Col3a1P08121 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Col3a1P08121 CT030182.3-201ENSMUST00000225986 582 ntBASIC4.1□□□□□ -1.75
Col3a1P08121 AC130823.2-201ENSMUST00000226169 290 ntBASIC4.1□□□□□ -1.75
Col3a1P08121 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Col3a1P08121 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC4.1□□□□□ -1.75
Col3a1P08121 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
Col3a1P08121 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Col3a1P08121 Cdh12-203ENSMUST00000227496 6004 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Col3a1P08121 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.09□□□□□ -1.75
Col3a1P08121 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Col3a1P08121 Gm12392-201ENSMUST00000118014 938 ntBASIC4.09□□□□□ -1.75
Col3a1P08121 Gm12313-201ENSMUST00000121347 421 ntBASIC4.09□□□□□ -1.75
Col3a1P08121 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Col3a1P08121 Gm22038-201ENSMUST00000157277 242 ntBASIC4.09□□□□□ -1.75
Col3a1P08121 Gm24198-201ENSMUST00000157812 108 ntBASIC4.09□□□□□ -1.75
Col3a1P08121 Gm23162-201ENSMUST00000175081 121 ntBASIC4.09□□□□□ -1.75
Col3a1P08121 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC4.09□□□□□ -1.75
Col3a1P08121 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC4.09□□□□□ -1.75
Col3a1P08121 Gm28785-201ENSMUST00000187478 379 ntBASIC4.09□□□□□ -1.75
Col3a1P08121 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC4.09□□□□□ -1.75
Col3a1P08121 Gm18775-201ENSMUST00000190763 586 ntBASIC4.09□□□□□ -1.75
Col3a1P08121 Gm37979-201ENSMUST00000193065 712 ntBASIC4.09□□□□□ -1.75
Col3a1P08121 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC4.09□□□□□ -1.75
Col3a1P08121 Gm43825-201ENSMUST00000199650 734 ntBASIC4.09□□□□□ -1.75
Col3a1P08121 Gm19649-201ENSMUST00000201126 822 ntBASIC4.09□□□□□ -1.75
Col3a1P08121 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Col3a1P08121 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms