Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Hmgb3O54879 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Hmgb3O54879 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC2.42□□□□□ -2.02
Hmgb3O54879 Gm24144-201ENSMUST00000082632 111 ntBASIC2.42□□□□□ -2.02
Hmgb3O54879 Gm25699-201ENSMUST00000082896 167 ntBASIC2.42□□□□□ -2.02
Hmgb3O54879 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Hmgb3O54879 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Hmgb3O54879 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.41□□□□□ -2.02
Hmgb3O54879 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Hmgb3O54879 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Hmgb3O54879 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC2.41□□□□□ -2.02
Hmgb3O54879 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Hmgb3O54879 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
Hmgb3O54879 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Hmgb3O54879 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Hmgb3O54879 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
Hmgb3O54879 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Hmgb3O54879 Gm15282-201ENSMUST00000117707 300 ntBASIC2.41□□□□□ -2.02
Hmgb3O54879 Gm14897-201ENSMUST00000118213 207 ntBASIC2.41□□□□□ -2.02
Hmgb3O54879 Gm5754-201ENSMUST00000118774 892 ntBASIC2.41□□□□□ -2.02
Hmgb3O54879 Gm16363-201ENSMUST00000132460 877 ntBASIC2.41□□□□□ -2.02
Hmgb3O54879 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC2.41□□□□□ -2.02
Hmgb3O54879 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC2.41□□□□□ -2.02
Hmgb3O54879 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC2.41□□□□□ -2.02
Hmgb3O54879 Mir3473f-201ENSMUST00000183743 136 ntBASIC2.41□□□□□ -2.02
Hmgb3O54879 Gm27893-201ENSMUST00000184408 194 ntBASIC2.41□□□□□ -2.02
Hmgb3O54879 Mir3620-201ENSMUST00000184710 61 ntBASIC2.41□□□□□ -2.02
Hmgb3O54879 Gm18727-201ENSMUST00000185981 553 ntBASIC2.41□□□□□ -2.02
Hmgb3O54879 Gm29597-201ENSMUST00000188035 308 ntBASIC2.41□□□□□ -2.02
Hmgb3O54879 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Hmgb3O54879 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC2.41□□□□□ -2.02
Hmgb3O54879 Gm28552-201ENSMUST00000190725 388 ntBASIC2.41□□□□□ -2.02
Hmgb3O54879 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC2.41□□□□□ -2.02
Hmgb3O54879 Gm37495-201ENSMUST00000194590 264 ntBASIC2.41□□□□□ -2.02
Hmgb3O54879 Gm18384-201ENSMUST00000195974 808 ntBASIC2.41□□□□□ -2.02
Hmgb3O54879 Amd-ps5-201ENSMUST00000198406 989 ntBASIC2.41□□□□□ -2.02
Hmgb3O54879 Gm17951-201ENSMUST00000198536 496 ntBASIC2.41□□□□□ -2.02
Hmgb3O54879 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC2.41□□□□□ -2.02
Hmgb3O54879 Gm9375-201ENSMUST00000208899 903 ntBASIC2.41□□□□□ -2.02
Hmgb3O54879 AC167250.1-201ENSMUST00000213739 3813 ntBASIC2.41□□□□□ -2.02
Hmgb3O54879 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC2.41□□□□□ -2.02
Hmgb3O54879 AC116395.1-201ENSMUST00000225480 1143 ntBASIC2.41□□□□□ -2.02
Hmgb3O54879 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Hmgb3O54879 AC164100.1-201ENSMUST00000227214 508 ntBASIC2.41□□□□□ -2.02
Hmgb3O54879 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Hmgb3O54879 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Hmgb3O54879 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Hmgb3O54879 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC2.41□□□□□ -2.02
Hmgb3O54879 n-R5s85-201ENSMUST00000083453 113 ntBASIC2.41□□□□□ -2.02
Hmgb3O54879 Mir184-201ENSMUST00000083662 69 ntBASIC2.41□□□□□ -2.02
Hmgb3O54879 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
Hmgb3O54879 Gm7739-201ENSMUST00000221131 1560 ntBASIC2.4□□□□□ -2.02
Hmgb3O54879 Gm37999-201ENSMUST00000195178 1809 ntBASIC2.4□□□□□ -2.02
Hmgb3O54879 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.02
Hmgb3O54879 Gm19965-201ENSMUST00000179777 3030 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Hmgb3O54879 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
Hmgb3O54879 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Hmgb3O54879 Mir592-201ENSMUST00000102113 96 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 Snord66-201ENSMUST00000104051 75 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 Gm22493-201ENSMUST00000104494 132 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 Gm13329-201ENSMUST00000117063 265 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 Gm15001-201ENSMUST00000117657 795 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.03
Hmgb3O54879 Gm9308-201ENSMUST00000119073 448 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 Gm14591-201ENSMUST00000120407 518 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 Gm12317-201ENSMUST00000122307 319 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 Gm14903-201ENSMUST00000122435 537 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.4□□□□□ -2.03
Hmgb3O54879 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC2.4□□□□□ -2.03
Hmgb3O54879 Gm23467-201ENSMUST00000157127 159 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 Gm25271-201ENSMUST00000157273 290 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 Gm15974-201ENSMUST00000159103 531 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 Gm25470-201ENSMUST00000175576 111 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 Gm29658-201ENSMUST00000185404 230 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.4□□□□□ -2.03
Hmgb3O54879 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC2.4□□□□□ -2.03
Hmgb3O54879 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
Hmgb3O54879 Gm44223-201ENSMUST00000204854 114 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC2.4□□□□□ -2.03
Hmgb3O54879 Gm45192-201ENSMUST00000206749 283 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 Gm45701-201ENSMUST00000212049 235 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 Gm18892-201ENSMUST00000217628 881 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 AC160931.2-201ENSMUST00000221445 351 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 AC091783.5-201ENSMUST00000224928 671 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 AC124729.1-201ENSMUST00000225327 976 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 AC154515.2-201ENSMUST00000226093 406 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Hmgb3O54879 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Hmgb3O54879 Gm10115-201ENSMUST00000076071 1228 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
Hmgb3O54879 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Hmgb3O54879 AC104897.1-201ENSMUST00000222638 3628 ntBASIC2.4□□□□□ -2.03
Hmgb3O54879 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Hmgb3O54879 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
Hmgb3O54879 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC2.39□□□□□ -2.03
Hmgb3O54879 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC2.39□□□□□ -2.03
Hmgb3O54879 Mir19b-1-201ENSMUST00000102301 87 ntBASIC2.39□□□□□ -2.03
Hmgb3O54879 Mir878-201ENSMUST00000104680 78 ntBASIC2.39□□□□□ -2.03
Hmgb3O54879 Mir294-201ENSMUST00000104710 84 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms