Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm25088-201ENSMUST00000101803 79 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm26387-201ENSMUST00000104238 132 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm25563-201ENSMUST00000104603 74 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm24855-201ENSMUST00000104848 97 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm15670-201ENSMUST00000117740 447 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm11878-201ENSMUST00000117908 400 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm15899-201ENSMUST00000128586 238 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm25966-201ENSMUST00000157169 117 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm25278-201ENSMUST00000157267 120 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm24930-201ENSMUST00000158315 83 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm22156-201ENSMUST00000158409 141 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm26402-201ENSMUST00000158499 113 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm22307-201ENSMUST00000180019 107 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm21232-201ENSMUST00000182187 1006 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm27161-201ENSMUST00000183960 562 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm37418-201ENSMUST00000195031 274 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm44465-201ENSMUST00000199536 114 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm4734-201ENSMUST00000200117 777 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm19131-201ENSMUST00000203408 789 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 AC125020.2-201ENSMUST00000218894 348 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 AC192333.1-201ENSMUST00000224573 376 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm24622-201ENSMUST00000082619 162 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm25800-201ENSMUST00000082636 134 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm23447-201ENSMUST00000082798 163 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm26111-201ENSMUST00000083969 106 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Smim4-203ENSMUST00000090205 426 ntTSL 2 BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm37625-201ENSMUST00000194969 4872 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Olfr714-203ENSMUST00000214429 4324 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Gm43718-201ENSMUST00000197524 1857 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.79□□□□□ -1.8
Shisa8J3QNX5 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Shisa8J3QNX5 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
Shisa8J3QNX5 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm13806-201ENSMUST00000117822 325 ntBASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm14605-201ENSMUST00000120599 268 ntBASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm13932-201ENSMUST00000120873 610 ntBASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm14678-201ENSMUST00000121396 482 ntBASIC3.78□□□□□ -1.8
Shisa8J3QNX5 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm26310-201ENSMUST00000157766 117 ntBASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm23513-201ENSMUST00000158181 133 ntBASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm25434-201ENSMUST00000158278 167 ntBASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm23028-201ENSMUST00000158773 265 ntBASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm20674-201ENSMUST00000177452 369 ntBASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm23619-201ENSMUST00000178411 94 ntBASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm25474-201ENSMUST00000179052 94 ntBASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm22047-201ENSMUST00000179176 94 ntBASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm28666-201ENSMUST00000186649 274 ntBASIC3.78□□□□□ -1.8
Shisa8J3QNX5 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC3.78□□□□□ -1.8
Shisa8J3QNX5 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm8041-201ENSMUST00000199755 616 ntBASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm6719-201ENSMUST00000202067 335 ntBASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm45032-201ENSMUST00000205375 520 ntBASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm45590-201ENSMUST00000209715 262 ntBASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm5917-201ENSMUST00000217638 721 ntBASIC3.78□□□□□ -1.8
Shisa8J3QNX5 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC3.78□□□□□ -1.8
Shisa8J3QNX5 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC3.78□□□□□ -1.8
Shisa8J3QNX5 Gm46996-201ENSMUST00000220924 408 ntBASIC3.78□□□□□ -1.8
Shisa8J3QNX5 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms