Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm7422-201ENSMUST00000220115 640 ntBASIC3.19□□□□□ -1.9
Scn3aA2ASI5 AC129308.2-201ENSMUST00000224588 789 ntBASIC3.19□□□□□ -1.9
Scn3aA2ASI5 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.19□□□□□ -1.9
Scn3aA2ASI5 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Scn3aA2ASI5 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Scn3aA2ASI5 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Scn3aA2ASI5 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Scn3aA2ASI5 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Scn3aA2ASI5 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.18□□□□□ -1.9
Scn3aA2ASI5 Gm12448-201ENSMUST00000118852 655 ntBASIC3.18□□□□□ -1.9
Scn3aA2ASI5 Gm13502-201ENSMUST00000121574 684 ntBASIC3.18□□□□□ -1.9
Scn3aA2ASI5 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Scn3aA2ASI5 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.18□□□□□ -1.9
Scn3aA2ASI5 Gm22226-201ENSMUST00000157355 109 ntBASIC3.18□□□□□ -1.9
Scn3aA2ASI5 Gm22885-201ENSMUST00000157410 107 ntBASIC3.18□□□□□ -1.9
Scn3aA2ASI5 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.18□□□□□ -1.9
Scn3aA2ASI5 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.18□□□□□ -1.9
Scn3aA2ASI5 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.18□□□□□ -1.9
Scn3aA2ASI5 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.18□□□□□ -1.9
Scn3aA2ASI5 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.18□□□□□ -1.9
Scn3aA2ASI5 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.18□□□□□ -1.9
Scn3aA2ASI5 Gm27535-201ENSMUST00000183814 157 ntBASIC3.18□□□□□ -1.9
Scn3aA2ASI5 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC3.18□□□□□ -1.9
Scn3aA2ASI5 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.18□□□□□ -1.9
Scn3aA2ASI5 AC151907.1-201ENSMUST00000228812 412 ntBASIC3.18□□□□□ -1.9
Scn3aA2ASI5 Gm44286-201ENSMUST00000204098 1487 ntBASIC3.18□□□□□ -1.9
Scn3aA2ASI5 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Scn3aA2ASI5 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.18□□□□□ -1.9
Scn3aA2ASI5 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Scn3aA2ASI5 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.17□□□□□ -1.9
Scn3aA2ASI5 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Scn3aA2ASI5 Gm43384-201ENSMUST00000200569 637 ntBASIC3.17□□□□□ -1.9
Scn3aA2ASI5 Gm43415-201ENSMUST00000201934 750 ntBASIC3.17□□□□□ -1.9
Scn3aA2ASI5 Gm34314-201ENSMUST00000203622 367 ntBASIC3.17□□□□□ -1.9
Scn3aA2ASI5 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.17□□□□□ -1.9
Scn3aA2ASI5 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Scn3aA2ASI5 AC167013.2-202ENSMUST00000227035 333 ntBASIC3.17□□□□□ -1.9
Scn3aA2ASI5 AC131720.1-201ENSMUST00000218629 2132 ntBASIC3.17□□□□□ -1.9
Scn3aA2ASI5 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Scn3aA2ASI5 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.17□□□□□ -1.9
Scn3aA2ASI5 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Scn3aA2ASI5 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.17□□□□□ -1.9
Scn3aA2ASI5 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.17□□□□□ -1.9
Scn3aA2ASI5 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.17□□□□□ -1.9
Scn3aA2ASI5 Gm12667-201ENSMUST00000118299 1332 ntBASIC3.17□□□□□ -1.9
Scn3aA2ASI5 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Scn3aA2ASI5 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.17□□□□□ -1.9
Scn3aA2ASI5 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Scn3aA2ASI5 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Scn3aA2ASI5 Gm28594-201ENSMUST00000187022 661 ntBASIC3.17□□□□□ -1.9
Scn3aA2ASI5 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Scn3aA2ASI5 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.17□□□□□ -1.9
Scn3aA2ASI5 Gm5551-201ENSMUST00000199720 690 ntBASIC3.17□□□□□ -1.9
Scn3aA2ASI5 Gm2436-201ENSMUST00000219562 774 ntBASIC3.17□□□□□ -1.9
Scn3aA2ASI5 AC154730.1-201ENSMUST00000227874 816 ntBASIC3.17□□□□□ -1.9
Scn3aA2ASI5 Gm28634-201ENSMUST00000191087 2613 ntBASIC3.17□□□□□ -1.9
Scn3aA2ASI5 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Scn3aA2ASI5 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Scn3aA2ASI5 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Scn3aA2ASI5 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.16□□□□□ -1.9
Scn3aA2ASI5 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.16□□□□□ -1.9
Scn3aA2ASI5 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.16□□□□□ -1.9
Scn3aA2ASI5 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Scn3aA2ASI5 Gm23128-201ENSMUST00000104257 132 ntBASIC3.16□□□□□ -1.9
Scn3aA2ASI5 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Scn3aA2ASI5 Gm14506-201ENSMUST00000121165 536 ntBASIC3.16□□□□□ -1.9
Scn3aA2ASI5 Gm22600-201ENSMUST00000157598 269 ntBASIC3.16□□□□□ -1.9
Scn3aA2ASI5 Gm25520-201ENSMUST00000158389 118 ntBASIC3.16□□□□□ -1.9
Scn3aA2ASI5 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC3.16□□□□□ -1.9
Scn3aA2ASI5 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC3.16□□□□□ -1.9
Scn3aA2ASI5 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.16□□□□□ -1.9
Scn3aA2ASI5 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC3.16□□□□□ -1.9
Scn3aA2ASI5 Gm18445-201ENSMUST00000195502 774 ntBASIC3.16□□□□□ -1.9
Scn3aA2ASI5 Gm23128-202ENSMUST00000196578 133 ntBASIC3.16□□□□□ -1.9
Scn3aA2ASI5 Gm44966-201ENSMUST00000208096 157 ntBASIC3.16□□□□□ -1.9
Scn3aA2ASI5 Gm45312-201ENSMUST00000210566 311 ntBASIC3.16□□□□□ -1.9
Scn3aA2ASI5 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Scn3aA2ASI5 Gm45814-201ENSMUST00000212646 775 ntBASIC3.16□□□□□ -1.9
Scn3aA2ASI5 AC154510.1-201ENSMUST00000223925 737 ntBASIC3.16□□□□□ -1.9
Scn3aA2ASI5 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Scn3aA2ASI5 Snora23-201ENSMUST00000082517 184 ntBASIC3.16□□□□□ -1.9
Scn3aA2ASI5 n-R5s176-201ENSMUST00000082683 109 ntBASIC3.16□□□□□ -1.9
Scn3aA2ASI5 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Scn3aA2ASI5 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Scn3aA2ASI5 Gm14448-201ENSMUST00000116383 210 ntBASIC3.15□□□□□ -1.9
Scn3aA2ASI5 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.15□□□□□ -1.9
Scn3aA2ASI5 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC3.15□□□□□ -1.9
Scn3aA2ASI5 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC3.15□□□□□ -1.9
Scn3aA2ASI5 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.15□□□□□ -1.9
Scn3aA2ASI5 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC3.15□□□□□ -1.9
Scn3aA2ASI5 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Scn3aA2ASI5 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Scn3aA2ASI5 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Scn3aA2ASI5 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Scn3aA2ASI5 Gm26458-201ENSMUST00000082832 128 ntBASIC3.15□□□□□ -1.9
Scn3aA2ASI5 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Scn3aA2ASI5 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.15□□□□□ -1.9
Scn3aA2ASI5 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.15□□□□□ -1.91
Scn3aA2ASI5 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.15□□□□□ -1.91
Scn3aA2ASI5 Gm26140-201ENSMUST00000103807 110 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms