Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.36□□□□□ -1.87
Trim3Q9R1R2 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Gm24581-201ENSMUST00000103962 133 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Gm8569-201ENSMUST00000117630 647 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Gm4732-201ENSMUST00000118778 473 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Gm13228-201ENSMUST00000118937 634 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Gm15103-201ENSMUST00000119893 871 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Gm11704-201ENSMUST00000120031 214 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Gm15387-201ENSMUST00000120421 648 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Gm15147-201ENSMUST00000122263 483 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Gm25105-201ENSMUST00000122477 130 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Mup-ps4-201ENSMUST00000151005 539 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Gm25981-201ENSMUST00000157921 295 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Gm25412-201ENSMUST00000180258 107 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Gm6501-201ENSMUST00000187178 916 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Gm10297-201ENSMUST00000207136 651 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.35□□□□□ -1.87
Trim3Q9R1R2 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC3.35□□□□□ -1.87
Trim3Q9R1R2 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Gm25205-201ENSMUST00000082841 103 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Mir350-201ENSMUST00000083639 99 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Gm5518-201ENSMUST00000084171 648 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trim3Q9R1R2 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Gm38278-201ENSMUST00000194715 1365 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 AC126673.3-201ENSMUST00000223414 3829 ntBASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Trim3Q9R1R2 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm2348-201ENSMUST00000108782 300 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm11869-201ENSMUST00000118701 329 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm11876-201ENSMUST00000120002 269 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm14600-201ENSMUST00000121032 630 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm13471-201ENSMUST00000122057 433 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm13676-201ENSMUST00000122185 591 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm4725-201ENSMUST00000151048 587 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm23583-201ENSMUST00000158533 289 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm28010-201ENSMUST00000179485 126 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm27477-201ENSMUST00000184649 143 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm3454-201ENSMUST00000185571 412 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm28552-201ENSMUST00000190725 388 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm36974-201ENSMUST00000194200 1071 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm37617-201ENSMUST00000194309 159 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm29704-201ENSMUST00000196011 253 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm31693-201ENSMUST00000200150 909 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm34091-201ENSMUST00000200875 604 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm43659-201ENSMUST00000200894 628 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Gm35857-201ENSMUST00000212739 178 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 AC124399.1-201ENSMUST00000218334 590 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Snord15a-201ENSMUST00000083888 148 ntBASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trim3Q9R1R2 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
Trim3Q9R1R2 AC164297.6-201ENSMUST00000224643 1568 ntBASIC3.34□□□□□ -1.88
Trim3Q9R1R2 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC3.34□□□□□ -1.88
Trim3Q9R1R2 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Gm14795-201ENSMUST00000118461 471 ntBASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Gm14687-201ENSMUST00000120206 363 ntBASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Gm23257-201ENSMUST00000158322 132 ntBASIC3.33□□□□□ -1.88
Trim3Q9R1R2 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms