Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Gm11284-201ENSMUST00000121910 1887 ntBASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.79□□□□□ -1.48
Prpf40aQ9R1C7 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 AC137842.3-201ENSMUST00000228855 2397 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm23750-201ENSMUST00000104222 132 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm11486-201ENSMUST00000107322 478 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm15844-201ENSMUST00000118016 576 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm15211-201ENSMUST00000118932 528 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm22596-201ENSMUST00000157601 316 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm24216-201ENSMUST00000158259 117 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm23258-201ENSMUST00000158319 106 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm22769-201ENSMUST00000158367 98 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Ighv1-27-201ENSMUST00000194473 340 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm37445-201ENSMUST00000195318 242 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm42876-201ENSMUST00000196989 3215 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm32453-201ENSMUST00000204183 456 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm45313-201ENSMUST00000210584 178 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 AC122317.3-201ENSMUST00000219320 3524 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 CT956049.1-201ENSMUST00000225671 763 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 AV026068-237ENSMUST00000226075 572 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Mir133b-201ENSMUST00000083546 119 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm26164-201ENSMUST00000083793 104 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm23741-201ENSMUST00000097237 171 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm14421-201ENSMUST00000121755 1958 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm10635-201ENSMUST00000217201 3721 ntTSL 2 BASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Gm37831-201ENSMUST00000191685 1787 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC5.78□□□□□ -1.48
Prpf40aQ9R1C7 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
Prpf40aQ9R1C7 Gm37983-201ENSMUST00000193207 2006 ntBASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Gm15773-201ENSMUST00000118665 1448 ntBASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Gm24235-201ENSMUST00000104319 129 ntBASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Gm12901-201ENSMUST00000118690 532 ntBASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Gm16353-201ENSMUST00000159458 1223 ntBASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Gm8114-201ENSMUST00000172225 484 ntBASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Gm24520-201ENSMUST00000179510 110 ntBASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Mir7087-201ENSMUST00000184840 70 ntBASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Gm44274-201ENSMUST00000203417 256 ntBASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Gm45005-201ENSMUST00000206640 157 ntBASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 AC164161.1-201ENSMUST00000214076 639 ntBASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 AC167229.1-201ENSMUST00000220057 469 ntBASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 AC174797.2-203ENSMUST00000224017 716 ntBASIC5.77□□□□□ -1.49
Prpf40aQ9R1C7 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms