Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm29573-201ENSMUST00000190291 919 ntBASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm18433-202ENSMUST00000195682 196 ntBASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm42593-201ENSMUST00000198469 377 ntBASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm6590-201ENSMUST00000203343 687 ntBASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm35876-201ENSMUST00000205044 459 ntBASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm45105-201ENSMUST00000207824 397 ntBASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.12□□□□□ -1.91
Trem1Q9JKE2 AC117240.2-201ENSMUST00000220921 263 ntBASIC3.12□□□□□ -1.91
Trem1Q9JKE2 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.12□□□□□ -1.91
Trem1Q9JKE2 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm9765-201ENSMUST00000043170 321 ntBASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm37387-201ENSMUST00000192201 1806 ntBASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm45263-201ENSMUST00000210377 1375 ntBASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trem1Q9JKE2 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.11□□□□□ -1.91
Trem1Q9JKE2 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Gm6913-201ENSMUST00000100019 348 ntBASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Mir1198-201ENSMUST00000116995 121 ntBASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Gm11372-201ENSMUST00000117348 570 ntBASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Gm15282-201ENSMUST00000117707 300 ntBASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Gm15613-201ENSMUST00000118396 326 ntBASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Gm12891-201ENSMUST00000119358 240 ntBASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Gm12213-201ENSMUST00000119924 353 ntBASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Gm12900-201ENSMUST00000120919 573 ntBASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC3.11□□□□□ -1.91
Trem1Q9JKE2 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Gm20612-201ENSMUST00000176318 236 ntBASIC3.11□□□□□ -1.91
Trem1Q9JKE2 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Mir6921-201ENSMUST00000183719 80 ntBASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Mir8103-201ENSMUST00000183945 107 ntBASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Gm29479-201ENSMUST00000190352 455 ntBASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Gm37281-201ENSMUST00000192412 439 ntBASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Gm42502-201ENSMUST00000198550 1089 ntBASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC3.11□□□□□ -1.91
Trem1Q9JKE2 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.11□□□□□ -1.91
Trem1Q9JKE2 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.11□□□□□ -1.91
Trem1Q9JKE2 AC152979.4-201ENSMUST00000219893 379 ntBASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Prl3d3-202ENSMUST00000223958 675 ntAPPRIS ALT2 BASIC3.11□□□□□ -1.91
Trem1Q9JKE2 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.11□□□□□ -1.91
Trem1Q9JKE2 AC125539.1-202ENSMUST00000226449 670 ntBASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Olfr506-201ENSMUST00000077343 1008 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Mir34b-201ENSMUST00000083558 84 ntBASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.11□□□□□ -1.91
Trem1Q9JKE2 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trem1Q9JKE2 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Trem1Q9JKE2 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Trem1Q9JKE2 Gm14159-201ENSMUST00000119832 451 ntBASIC3.1□□□□□ -1.91
Trem1Q9JKE2 Gm12873-201ENSMUST00000119988 422 ntBASIC3.1□□□□□ -1.91
Trem1Q9JKE2 Gm11252-201ENSMUST00000120572 939 ntBASIC3.1□□□□□ -1.91
Trem1Q9JKE2 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC3.1□□□□□ -1.91
Trem1Q9JKE2 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.1□□□□□ -1.91
Trem1Q9JKE2 Gm23906-201ENSMUST00000157573 128 ntBASIC3.1□□□□□ -1.91
Trem1Q9JKE2 Gm25369-201ENSMUST00000158848 132 ntBASIC3.1□□□□□ -1.91
Trem1Q9JKE2 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.1□□□□□ -1.91
Trem1Q9JKE2 Gm27522-201ENSMUST00000183949 230 ntBASIC3.1□□□□□ -1.91
Trem1Q9JKE2 Mir6383-201ENSMUST00000184545 116 ntBASIC3.1□□□□□ -1.91
Trem1Q9JKE2 Gm7634-201ENSMUST00000185778 553 ntBASIC3.1□□□□□ -1.91
Trem1Q9JKE2 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.1□□□□□ -1.91
Trem1Q9JKE2 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Trem1Q9JKE2 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.1□□□□□ -1.91
Trem1Q9JKE2 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.1□□□□□ -1.91
Trem1Q9JKE2 Gm37616-201ENSMUST00000193974 322 ntBASIC3.1□□□□□ -1.91
Trem1Q9JKE2 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.1□□□□□ -1.91
Trem1Q9JKE2 Gm43541-201ENSMUST00000197208 581 ntBASIC3.1□□□□□ -1.91
Trem1Q9JKE2 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC3.1□□□□□ -1.91
Trem1Q9JKE2 Gm9373-201ENSMUST00000208724 599 ntBASIC3.1□□□□□ -1.91
Trem1Q9JKE2 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Trem1Q9JKE2 Gm6012-201ENSMUST00000210821 730 ntBASIC3.1□□□□□ -1.91
Trem1Q9JKE2 Gm35857-201ENSMUST00000212739 178 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms