Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Gm13761-201ENSMUST00000117238 807 ntBASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Gm11446-201ENSMUST00000121319 866 ntBASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Gm14578-201ENSMUST00000122166 391 ntBASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Gm12755-201ENSMUST00000122297 282 ntBASIC3.04□□□□□ -1.92
Lima1Q9ERG0 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Gm16274-201ENSMUST00000139251 592 ntBASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Gm25198-201ENSMUST00000178574 110 ntBASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Mir8096-201ENSMUST00000184526 127 ntBASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Gm28628-201ENSMUST00000187006 264 ntBASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Gm28629-201ENSMUST00000187309 263 ntBASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Ighv1-41-201ENSMUST00000194414 329 ntBASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.04□□□□□ -1.92
Lima1Q9ERG0 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Gm18660-201ENSMUST00000199542 629 ntBASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Gm45420-201ENSMUST00000211243 425 ntBASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Gm18015-201ENSMUST00000214879 316 ntBASIC3.04□□□□□ -1.92
Lima1Q9ERG0 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC3.04□□□□□ -1.92
Lima1Q9ERG0 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Gm6841-201ENSMUST00000220602 598 ntBASIC3.04□□□□□ -1.92
Lima1Q9ERG0 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.04□□□□□ -1.92
Lima1Q9ERG0 AC165437.1-201ENSMUST00000228640 536 ntBASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Lima1Q9ERG0 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Gm25764-201ENSMUST00000104092 134 ntBASIC3.03□□□□□ -1.92
Lima1Q9ERG0 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Gm15108-201ENSMUST00000116160 803 ntBASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Gm15001-201ENSMUST00000117657 795 ntBASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Gm12587-201ENSMUST00000120180 427 ntBASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Gm12276-201ENSMUST00000121709 301 ntBASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Gm15111-201ENSMUST00000122142 878 ntBASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Gm22208-201ENSMUST00000122658 110 ntBASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Gm24720-201ENSMUST00000157518 166 ntBASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Gm27163-201ENSMUST00000184767 409 ntBASIC3.03□□□□□ -1.92
Lima1Q9ERG0 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Gm37417-201ENSMUST00000195257 454 ntBASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Gm43393-201ENSMUST00000200147 194 ntBASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Gm43295-201ENSMUST00000201439 412 ntBASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.03□□□□□ -1.92
Lima1Q9ERG0 AC116395.1-201ENSMUST00000225480 1143 ntBASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Gm24611-201ENSMUST00000083272 107 ntBASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Lima1Q9ERG0 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
Lima1Q9ERG0 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Gm14142-201ENSMUST00000117833 296 ntBASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Gm12458-201ENSMUST00000119387 495 ntBASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Gm23167-201ENSMUST00000157155 103 ntBASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Gm23326-201ENSMUST00000157419 105 ntBASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Gm25341-201ENSMUST00000157461 268 ntBASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Gm27233-201ENSMUST00000184030 307 ntBASIC3.02□□□□□ -1.93
Lima1Q9ERG0 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Gm44084-201ENSMUST00000203947 409 ntBASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Gm44513-201ENSMUST00000206811 439 ntBASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Gm44824-201ENSMUST00000207021 229 ntBASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Gm45189-201ENSMUST00000208567 363 ntBASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Gm18363-201ENSMUST00000221671 730 ntBASIC3.02□□□□□ -1.93
Lima1Q9ERG0 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Gm5185-201ENSMUST00000080271 619 ntBASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Gm24533-201ENSMUST00000083138 196 ntBASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Gm42483-201ENSMUST00000197556 1742 ntBASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Lima1Q9ERG0 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Gm14825-201ENSMUST00000113538 701 ntBASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Gm13614-201ENSMUST00000117306 503 ntBASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Gm12954-201ENSMUST00000118610 611 ntBASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Gm14739-201ENSMUST00000120424 802 ntBASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Gm6762-201ENSMUST00000121769 289 ntBASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Gm26020-201ENSMUST00000122729 183 ntBASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.01□□□□□ -1.93
Lima1Q9ERG0 Gm26277-201ENSMUST00000157097 152 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms