Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Mir344c-201ENSMUST00000103919 92 ntBASIC3.82□□□□□ -1.8
Cpsf1Q9EPU4 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.82□□□□□ -1.8
Cpsf1Q9EPU4 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC3.82□□□□□ -1.8
Cpsf1Q9EPU4 Gm20660-201ENSMUST00000177515 289 ntBASIC3.82□□□□□ -1.8
Cpsf1Q9EPU4 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Cpsf1Q9EPU4 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Cpsf1Q9EPU4 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.82□□□□□ -1.8
Cpsf1Q9EPU4 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC3.82□□□□□ -1.8
Cpsf1Q9EPU4 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Cpsf1Q9EPU4 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.82□□□□□ -1.8
Cpsf1Q9EPU4 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Cpsf1Q9EPU4 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Cpsf1Q9EPU4 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.82□□□□□ -1.8
Cpsf1Q9EPU4 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.81□□□□□ -1.8
Cpsf1Q9EPU4 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Cpsf1Q9EPU4 Gm14897-201ENSMUST00000118213 207 ntBASIC3.81□□□□□ -1.8
Cpsf1Q9EPU4 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.81□□□□□ -1.8
Cpsf1Q9EPU4 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC3.81□□□□□ -1.8
Cpsf1Q9EPU4 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Cpsf1Q9EPU4 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.81□□□□□ -1.8
Cpsf1Q9EPU4 Gm24816-201ENSMUST00000175311 151 ntBASIC3.81□□□□□ -1.8
Cpsf1Q9EPU4 Mir7068-201ENSMUST00000183439 74 ntBASIC3.81□□□□□ -1.8
Cpsf1Q9EPU4 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Cpsf1Q9EPU4 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Cpsf1Q9EPU4 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.81□□□□□ -1.8
Cpsf1Q9EPU4 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC3.81□□□□□ -1.8
Cpsf1Q9EPU4 Gm44703-201ENSMUST00000205724 248 ntBASIC3.81□□□□□ -1.8
Cpsf1Q9EPU4 Gm6842-201ENSMUST00000211361 390 ntBASIC3.81□□□□□ -1.8
Cpsf1Q9EPU4 AC171206.1-201ENSMUST00000213612 213 ntBASIC3.81□□□□□ -1.8
Cpsf1Q9EPU4 Gm30674-201ENSMUST00000214523 392 ntBASIC3.81□□□□□ -1.8
Cpsf1Q9EPU4 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Cpsf1Q9EPU4 Gm18441-201ENSMUST00000223539 617 ntBASIC3.81□□□□□ -1.8
Cpsf1Q9EPU4 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC3.81□□□□□ -1.8
Cpsf1Q9EPU4 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Cpsf1Q9EPU4 Gm24274-201ENSMUST00000116787 124 ntBASIC3.8□□□□□ -1.8
Cpsf1Q9EPU4 Gm25153-201ENSMUST00000157118 156 ntBASIC3.8□□□□□ -1.8
Cpsf1Q9EPU4 Gm23152-201ENSMUST00000175322 116 ntBASIC3.8□□□□□ -1.8
Cpsf1Q9EPU4 Gm28923-201ENSMUST00000187755 322 ntBASIC3.8□□□□□ -1.8
Cpsf1Q9EPU4 Scgb2b31-ps-201ENSMUST00000188734 328 ntBASIC3.8□□□□□ -1.8
Cpsf1Q9EPU4 Gm44208-201ENSMUST00000205199 421 ntBASIC3.8□□□□□ -1.8
Cpsf1Q9EPU4 Gm45588-201ENSMUST00000211213 630 ntBASIC3.8□□□□□ -1.8
Cpsf1Q9EPU4 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.8□□□□□ -1.8
Cpsf1Q9EPU4 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.8□□□□□ -1.8
Cpsf1Q9EPU4 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.8□□□□□ -1.8
Cpsf1Q9EPU4 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.8□□□□□ -1.8
Cpsf1Q9EPU4 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.8□□□□□ -1.8
Cpsf1Q9EPU4 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Cpsf1Q9EPU4 Gm9432-201ENSMUST00000117810 759 ntBASIC3.79□□□□□ -1.8
Cpsf1Q9EPU4 Mup-ps13-201ENSMUST00000120662 545 ntBASIC3.79□□□□□ -1.8
Cpsf1Q9EPU4 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.79□□□□□ -1.8
Cpsf1Q9EPU4 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC3.79□□□□□ -1.8
Cpsf1Q9EPU4 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cpsf1Q9EPU4 Gm23268-201ENSMUST00000175494 78 ntBASIC3.79□□□□□ -1.8
Cpsf1Q9EPU4 Gm22108-201ENSMUST00000177961 106 ntBASIC3.79□□□□□ -1.8
Cpsf1Q9EPU4 Gm24798-201ENSMUST00000179334 106 ntBASIC3.79□□□□□ -1.8
Cpsf1Q9EPU4 Gm29556-201ENSMUST00000187591 696 ntBASIC3.79□□□□□ -1.8
Cpsf1Q9EPU4 Trbv7-201ENSMUST00000193339 402 ntBASIC3.79□□□□□ -1.8
Cpsf1Q9EPU4 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Cpsf1Q9EPU4 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cpsf1Q9EPU4 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Cpsf1Q9EPU4 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Cpsf1Q9EPU4 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Cpsf1Q9EPU4 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Cpsf1Q9EPU4 Gm22782-201ENSMUST00000104082 132 ntBASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Gm13349-201ENSMUST00000118436 411 ntBASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Gm14333-201ENSMUST00000130484 264 ntBASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Gm37629-201ENSMUST00000193635 1050 ntBASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Gm6321-201ENSMUST00000194460 1090 ntBASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Gm43104-201ENSMUST00000197234 311 ntBASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Gm43368-201ENSMUST00000200638 409 ntBASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Gm12985-201ENSMUST00000118376 183 ntBASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Gm16218-201ENSMUST00000155424 388 ntBASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Gm23409-201ENSMUST00000158516 237 ntBASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Gm22664-201ENSMUST00000158719 105 ntBASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Gm17194-201ENSMUST00000164610 348 ntBASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Gm37353-201ENSMUST00000194497 313 ntBASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Gm43264-201ENSMUST00000202284 325 ntBASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 AC154329.2-201ENSMUST00000225257 383 ntBASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Gm8074-201ENSMUST00000095071 252 ntBASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Cpsf1Q9EPU4 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Cpsf1Q9EPU4 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Cpsf1Q9EPU4 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Cpsf1Q9EPU4 Mir294-201ENSMUST00000104710 84 ntBASIC3.77□□□□□ -1.81
Cpsf1Q9EPU4 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms