Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm28697-202ENSMUST00000188821 622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm28521-201ENSMUST00000188948 622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm28877-201ENSMUST00000191349 604 ntBASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm43232-201ENSMUST00000201346 364 ntBASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm44964-201ENSMUST00000207011 273 ntBASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm45513-201ENSMUST00000210228 376 ntBASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm8423-201ENSMUST00000211387 607 ntBASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 LOC667541-201ENSMUST00000223408 278 ntBASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm9818-201ENSMUST00000050900 255 ntBASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm26064-201ENSMUST00000083381 109 ntBASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ccdc3Q9D6Y1 Gm26423-201ENSMUST00000104277 128 ntBASIC3.1□□□□□ -1.91
Ccdc3Q9D6Y1 Gm22345-201ENSMUST00000122644 107 ntBASIC3.1□□□□□ -1.91
Ccdc3Q9D6Y1 Gm24061-201ENSMUST00000157489 120 ntBASIC3.1□□□□□ -1.91
Ccdc3Q9D6Y1 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Ccdc3Q9D6Y1 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC3.1□□□□□ -1.91
Ccdc3Q9D6Y1 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Ccdc3Q9D6Y1 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.1□□□□□ -1.91
Ccdc3Q9D6Y1 Gm28358-202ENSMUST00000189292 223 ntBASIC3.1□□□□□ -1.91
Ccdc3Q9D6Y1 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.1□□□□□ -1.91
Ccdc3Q9D6Y1 Gm3010-201ENSMUST00000198805 448 ntBASIC3.1□□□□□ -1.91
Ccdc3Q9D6Y1 Gm45701-201ENSMUST00000212049 235 ntBASIC3.1□□□□□ -1.91
Ccdc3Q9D6Y1 Gm18585-201ENSMUST00000215197 556 ntBASIC3.1□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.1□□□□□ -1.91
Ccdc3Q9D6Y1 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.1□□□□□ -1.91
Ccdc3Q9D6Y1 AC165437.1-201ENSMUST00000228640 536 ntBASIC3.1□□□□□ -1.91
Ccdc3Q9D6Y1 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Ccdc3Q9D6Y1 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Ccdc3Q9D6Y1 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Ccdc3Q9D6Y1 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC3.1□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Ccdc3Q9D6Y1 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.09□□□□□ -1.91
Ccdc3Q9D6Y1 Gm23380-201ENSMUST00000158448 103 ntBASIC3.09□□□□□ -1.91
Ccdc3Q9D6Y1 Gm25971-201ENSMUST00000158953 286 ntBASIC3.09□□□□□ -1.91
Ccdc3Q9D6Y1 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.09□□□□□ -1.91
Ccdc3Q9D6Y1 Gm29259-201ENSMUST00000186396 694 ntBASIC3.09□□□□□ -1.91
Ccdc3Q9D6Y1 Gm28113-201ENSMUST00000188280 229 ntBASIC3.09□□□□□ -1.91
Ccdc3Q9D6Y1 Gm43214-201ENSMUST00000199242 352 ntBASIC3.09□□□□□ -1.91
Ccdc3Q9D6Y1 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.09□□□□□ -1.91
Ccdc3Q9D6Y1 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.09□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC3.09□□□□□ -1.91
Ccdc3Q9D6Y1 AC123618.1-201ENSMUST00000220174 360 ntBASIC3.09□□□□□ -1.91
Ccdc3Q9D6Y1 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.09□□□□□ -1.91
Ccdc3Q9D6Y1 Gm4263-202ENSMUST00000221392 667 ntBASIC3.09□□□□□ -1.91
Ccdc3Q9D6Y1 Gm18363-201ENSMUST00000221671 730 ntBASIC3.09□□□□□ -1.91
Ccdc3Q9D6Y1 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ccdc3Q9D6Y1 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ccdc3Q9D6Y1 Gm22249-201ENSMUST00000082485 136 ntBASIC3.09□□□□□ -1.91
Ccdc3Q9D6Y1 Gm22979-201ENSMUST00000082609 159 ntBASIC3.09□□□□□ -1.91
Ccdc3Q9D6Y1 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.09□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Ccdc3Q9D6Y1 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Ccdc3Q9D6Y1 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Mir1198-201ENSMUST00000116995 121 ntBASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Gm13504-201ENSMUST00000117490 316 ntBASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Gm14162-201ENSMUST00000121985 601 ntBASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Gm15466-201ENSMUST00000122299 333 ntBASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Gm24190-201ENSMUST00000157976 216 ntBASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Gm28002-201ENSMUST00000184832 100 ntBASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Gm28191-201ENSMUST00000189112 211 ntBASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Trbv27-201ENSMUST00000193711 277 ntBASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Gm45344-201ENSMUST00000211610 341 ntBASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Gm8274-201ENSMUST00000219820 463 ntBASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Gm6841-201ENSMUST00000220602 598 ntBASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 AL662807.1-201ENSMUST00000224183 126 ntBASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 AF357341-201ENSMUST00000083088 75 ntBASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Gm25004-201ENSMUST00000083811 161 ntBASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Ccdc3Q9D6Y1 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms