Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Gm3104-201ENSMUST00000171004 473 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Gm10410-201ENSMUST00000180138 384 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Gm27210-201ENSMUST00000184263 402 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Gm29668-201ENSMUST00000187802 315 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Gm19193-201ENSMUST00000190263 590 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Gm37338-201ENSMUST00000191986 127 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Gm38053-201ENSMUST00000193938 160 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Ighv1-14-201ENSMUST00000194015 402 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Igkv13-64-201ENSMUST00000198143 343 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Gm18213-201ENSMUST00000207850 178 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Gm8940-201ENSMUST00000212585 219 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 AC093926.1-201ENSMUST00000213730 243 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC5.28□□□□□ -1.56
Trim42Q9D2H5 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 AV026068-216ENSMUST00000223874 328 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 AC154239.1-201ENSMUST00000228565 406 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 AC165284.1-201ENSMUST00000228614 458 ntBASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Trim42Q9D2H5 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Trim42Q9D2H5 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 AC154313.1-201ENSMUST00000217755 3841 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Smc5-206ENSMUST00000226111 3265 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm14142-201ENSMUST00000117833 296 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm13772-201ENSMUST00000118431 317 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm11742-201ENSMUST00000119903 233 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm15331-201ENSMUST00000120225 385 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm13932-201ENSMUST00000120873 610 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm14287-201ENSMUST00000121060 117 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm23995-201ENSMUST00000158060 129 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm17366-201ENSMUST00000167629 187 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm3170-201ENSMUST00000168753 850 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm3348-201ENSMUST00000177813 850 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm19206-201ENSMUST00000186401 827 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm37430-201ENSMUST00000193039 196 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm43456-201ENSMUST00000202519 457 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm35931-201ENSMUST00000203931 448 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trim42Q9D2H5 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm6988-201ENSMUST00000222676 375 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm5955-201ENSMUST00000222712 219 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm5045-201ENSMUST00000027054 810 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm22456-201ENSMUST00000082578 125 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Trim42Q9D2H5 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.27□□□□□ -1.57
Trim42Q9D2H5 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Trim42Q9D2H5 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.26□□□□□ -1.57
Trim42Q9D2H5 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim42Q9D2H5 AC151734.1-201ENSMUST00000227023 1740 ntBASIC5.26□□□□□ -1.57
Trim42Q9D2H5 Gm43882-201ENSMUST00000204871 2264 ntBASIC5.26□□□□□ -1.57
Trim42Q9D2H5 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim42Q9D2H5 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Trim42Q9D2H5 Gm20486-201ENSMUST00000101544 128 ntBASIC5.26□□□□□ -1.57
Trim42Q9D2H5 Gm24434-201ENSMUST00000104081 132 ntBASIC5.26□□□□□ -1.57
Trim42Q9D2H5 Gm22374-201ENSMUST00000104583 132 ntBASIC5.26□□□□□ -1.57
Trim42Q9D2H5 Gm22371-201ENSMUST00000104588 130 ntBASIC5.26□□□□□ -1.57
Trim42Q9D2H5 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Trim42Q9D2H5 Gm14874-201ENSMUST00000118995 438 ntBASIC5.26□□□□□ -1.57
Trim42Q9D2H5 Gm15781-201ENSMUST00000120216 323 ntBASIC5.26□□□□□ -1.57
Trim42Q9D2H5 Gm14915-201ENSMUST00000120747 204 ntBASIC5.26□□□□□ -1.57
Trim42Q9D2H5 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC5.26□□□□□ -1.57
Trim42Q9D2H5 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC5.26□□□□□ -1.57
Trim42Q9D2H5 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC5.26□□□□□ -1.57
Trim42Q9D2H5 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC5.26□□□□□ -1.57
Trim42Q9D2H5 Gm22084-201ENSMUST00000157585 105 ntBASIC5.26□□□□□ -1.57
Trim42Q9D2H5 Gm23896-201ENSMUST00000158109 130 ntBASIC5.26□□□□□ -1.57
Trim42Q9D2H5 Gm25439-201ENSMUST00000158280 131 ntBASIC5.26□□□□□ -1.57
Trim42Q9D2H5 Gm4222-201ENSMUST00000165784 470 ntBASIC5.26□□□□□ -1.57
Trim42Q9D2H5 Gm17152-201ENSMUST00000172430 535 ntBASIC5.26□□□□□ -1.57
Trim42Q9D2H5 Gm26400-201ENSMUST00000175012 85 ntBASIC5.26□□□□□ -1.57
Trim42Q9D2H5 Gm27512-201ENSMUST00000175328 126 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms