Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm6207-201ENSMUST00000120075 1386 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm6228-201ENSMUST00000178856 1386 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm6221-201ENSMUST00000180064 1386 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm23014-201ENSMUST00000104144 130 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Mir294-201ENSMUST00000104710 84 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm12719-201ENSMUST00000118859 241 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm14359-201ENSMUST00000118883 424 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm15231-201ENSMUST00000119174 447 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm14766-201ENSMUST00000121689 367 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm13745-201ENSMUST00000121994 527 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm13868-201ENSMUST00000122411 294 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 n-R5s207-201ENSMUST00000122497 118 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm10059-201ENSMUST00000131139 171 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm9498-201ENSMUST00000140849 291 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm26373-201ENSMUST00000157833 103 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm24666-201ENSMUST00000158937 167 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm22177-201ENSMUST00000175002 158 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm19498-201ENSMUST00000191128 331 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm18160-201ENSMUST00000214279 827 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 AC154603.1-201ENSMUST00000224355 313 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 AC101945.3-201ENSMUST00000226568 153 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 AC112972.1-201ENSMUST00000227329 365 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 AC133076.1-201ENSMUST00000228074 484 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 AC102291.2-201ENSMUST00000228083 367 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm23097-201ENSMUST00000083448 105 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm23503-201ENSMUST00000083903 107 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm43924-201ENSMUST00000204851 1736 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Gm42870-201ENSMUST00000199355 3470 ntBASIC4.69□□□□□ -1.66
Ddx56Q9D0R4 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Gm12433-201ENSMUST00000119659 255 ntBASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Gm12770-201ENSMUST00000121734 462 ntBASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Gm27599-201ENSMUST00000183758 174 ntBASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Scgb2b6-201ENSMUST00000188132 330 ntBASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Gm6651-201ENSMUST00000189471 271 ntBASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Gm44118-201ENSMUST00000204665 229 ntBASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Gm2676-201ENSMUST00000207279 606 ntBASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Gm45232-201ENSMUST00000207811 162 ntBASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Gm6240-201ENSMUST00000208014 473 ntBASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Gm18320-201ENSMUST00000211304 595 ntBASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Gm45499-201ENSMUST00000211656 280 ntBASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 AC153971.2-201ENSMUST00000214553 777 ntBASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 CT030135.1-201ENSMUST00000223760 570 ntBASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
Ddx56Q9D0R4 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Mir105-201ENSMUST00000104655 80 ntBASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Gm7834-201ENSMUST00000117560 437 ntBASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Gm15058-201ENSMUST00000117689 458 ntBASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Mup-ps17-201ENSMUST00000120723 218 ntBASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Gm22530-201ENSMUST00000158820 118 ntBASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.67□□□□□ -1.66
Ddx56Q9D0R4 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms