Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Ddx28Q9CWT6 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.65□□□□□ -1.82
Ddx28Q9CWT6 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm14125-201ENSMUST00000113442 680 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm15377-201ENSMUST00000119594 246 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm11991-201ENSMUST00000119652 1074 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm6587-201ENSMUST00000120219 613 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm14605-201ENSMUST00000120599 268 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm13973-201ENSMUST00000121371 894 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm14473-201ENSMUST00000122269 557 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm22211-201ENSMUST00000158097 156 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm20542-201ENSMUST00000174582 372 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm22108-201ENSMUST00000177961 106 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm24798-201ENSMUST00000179334 106 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Mir3620-201ENSMUST00000184710 61 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Mir6933-201ENSMUST00000184982 81 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm3454-201ENSMUST00000185571 412 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm28594-201ENSMUST00000187022 661 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm28113-201ENSMUST00000188280 229 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm43415-201ENSMUST00000201934 750 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm10988-201ENSMUST00000209150 1088 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm7380-201ENSMUST00000211599 466 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm18252-203ENSMUST00000215855 757 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm46146-201ENSMUST00000217483 346 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 AC164597.2-201ENSMUST00000226738 603 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 AC144819.1-201ENSMUST00000227015 620 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 AC158142.2-201ENSMUST00000227892 635 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm25404-201ENSMUST00000082970 107 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm14421-201ENSMUST00000121755 1958 ntBASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Ddx28Q9CWT6 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm43871-201ENSMUST00000204931 1955 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm23319-201ENSMUST00000104467 131 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm24318-201ENSMUST00000104490 131 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm12393-201ENSMUST00000117084 848 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm9308-201ENSMUST00000119073 448 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm13419-201ENSMUST00000121711 271 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm22277-201ENSMUST00000157204 277 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm24060-201ENSMUST00000157494 95 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm25883-201ENSMUST00000157781 271 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm23554-201ENSMUST00000157818 110 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm26036-201ENSMUST00000158149 144 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm17155-201ENSMUST00000165969 473 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Mir3112-201ENSMUST00000175431 82 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Mir6926-201ENSMUST00000184562 68 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm28560-201ENSMUST00000186091 315 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm28334-201ENSMUST00000186653 315 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm28495-201ENSMUST00000188452 315 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm28232-201ENSMUST00000188683 315 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm28481-201ENSMUST00000189231 315 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm6445-201ENSMUST00000189515 1112 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm29459-201ENSMUST00000191359 518 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm29059-201ENSMUST00000191534 315 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm37765-201ENSMUST00000192395 315 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm37237-201ENSMUST00000192893 315 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm36968-201ENSMUST00000193737 315 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm38290-201ENSMUST00000195238 315 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm5983-201ENSMUST00000197739 770 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm43604-201ENSMUST00000199799 705 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm7407-201ENSMUST00000208301 568 ntBASIC3.64□□□□□ -1.83
Ddx28Q9CWT6 Gm35325-201ENSMUST00000208979 771 ntTSL 2 BASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 113.3 ms