Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 AC152946.2-201ENSMUST00000219071 337 ntBASIC3.96□□□□□ -1.78
Smc1aQ9CU62 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.96□□□□□ -1.78
Smc1aQ9CU62 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Smc1aQ9CU62 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Smc1aQ9CU62 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Smc1aQ9CU62 Gm12873-201ENSMUST00000119988 422 ntBASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Gm16005-201ENSMUST00000120515 269 ntBASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Gm15274-201ENSMUST00000131442 291 ntBASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Gm21979-201ENSMUST00000139887 291 ntBASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Gm15259-201ENSMUST00000151262 291 ntBASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Gm15279-201ENSMUST00000155593 288 ntBASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Gm24534-201ENSMUST00000157949 291 ntBASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Gm23505-201ENSMUST00000158989 130 ntBASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Gm25535-201ENSMUST00000175364 125 ntBASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Gm26933-201ENSMUST00000182320 827 ntBASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Gm7909-201ENSMUST00000182688 614 ntBASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Gm36974-201ENSMUST00000194200 1071 ntBASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Gm44824-201ENSMUST00000207021 229 ntBASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Gm18194-201ENSMUST00000210455 481 ntBASIC3.95□□□□□ -1.78
Smc1aQ9CU62 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.95□□□□□ -1.78
Smc1aQ9CU62 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Smc1aQ9CU62 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.95□□□□□ -1.78
Smc1aQ9CU62 AC154692.1-201ENSMUST00000228314 544 ntBASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Gm18300-201ENSMUST00000192792 1406 ntBASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Smc1aQ9CU62 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.95□□□□□ -1.78
Smc1aQ9CU62 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
Smc1aQ9CU62 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.94□□□□□ -1.78
Smc1aQ9CU62 AC164297.6-201ENSMUST00000224643 1568 ntBASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Mir294-201ENSMUST00000104710 84 ntBASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Gm11896-201ENSMUST00000121105 820 ntBASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Gm14162-201ENSMUST00000121985 601 ntBASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Gm23391-201ENSMUST00000157579 104 ntBASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Gm6374-201ENSMUST00000159051 788 ntBASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.94□□□□□ -1.78
Smc1aQ9CU62 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Smc1aQ9CU62 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Gm43478-201ENSMUST00000200381 292 ntBASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Gm2189-201ENSMUST00000201419 429 ntBASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.94□□□□□ -1.78
Smc1aQ9CU62 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC3.94□□□□□ -1.78
Smc1aQ9CU62 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Gm21007-201ENSMUST00000221024 326 ntBASIC3.94□□□□□ -1.78
Smc1aQ9CU62 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Gm24626-201ENSMUST00000082621 161 ntBASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Gm25799-201ENSMUST00000082643 107 ntBASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Smc1aQ9CU62 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Gm14570-201ENSMUST00000119444 391 ntBASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Gm14008-201ENSMUST00000120483 274 ntBASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Mir5127-201ENSMUST00000175295 71 ntBASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Gm28010-201ENSMUST00000179485 126 ntBASIC3.93□□□□□ -1.78
Smc1aQ9CU62 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Gm29576-201ENSMUST00000188020 678 ntBASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Gm28354-201ENSMUST00000190904 678 ntBASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Gm44118-201ENSMUST00000204665 229 ntBASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Gm45380-201ENSMUST00000210465 315 ntBASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Gm46194-201ENSMUST00000218136 320 ntBASIC3.93□□□□□ -1.78
Smc1aQ9CU62 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Smc1aQ9CU62 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms