Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 Gm17030-201ENSMUST00000167016 393 ntBASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 Gm25748-201ENSMUST00000175487 70 ntBASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 Gm26991-201ENSMUST00000180950 620 ntBASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 Gm28923-201ENSMUST00000187755 322 ntBASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 Gm29525-201ENSMUST00000189844 699 ntBASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 Gm28314-201ENSMUST00000191276 345 ntBASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 Gm37290-201ENSMUST00000195775 339 ntBASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 Gm9712-201ENSMUST00000210842 311 ntBASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.17□□□□□ -1.9
Rpa3Q9CQ71 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Gm37879-201ENSMUST00000193112 1995 ntBASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Gm24935-201ENSMUST00000103770 110 ntBASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Gm13511-201ENSMUST00000121167 363 ntBASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Gm14907-201ENSMUST00000121948 854 ntBASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Gm8988-201ENSMUST00000155015 1240 ntBASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Gm26928-201ENSMUST00000182674 572 ntBASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Gm28146-201ENSMUST00000185517 701 ntBASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Gm37104-201ENSMUST00000193278 196 ntBASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Gm37418-201ENSMUST00000195031 274 ntBASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Gm34091-201ENSMUST00000200875 604 ntBASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Olfr131-201ENSMUST00000059560 1030 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Mir184-201ENSMUST00000083662 69 ntBASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Rpa3Q9CQ71 Gm24127-201ENSMUST00000104110 130 ntBASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Gm15019-201ENSMUST00000120148 434 ntBASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Gm15244-201ENSMUST00000121122 130 ntBASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Gm22107-201ENSMUST00000122548 100 ntBASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Gm24190-201ENSMUST00000157976 216 ntBASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Gm28534-201ENSMUST00000187744 676 ntBASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Gm37288-201ENSMUST00000193963 334 ntBASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Gm37431-201ENSMUST00000195102 111 ntBASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Gm37490-201ENSMUST00000195566 724 ntBASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Gm43316-201ENSMUST00000197252 1295 ntBASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Gm46233-201ENSMUST00000217831 449 ntBASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 AC122924.1-201ENSMUST00000222044 163 ntBASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Gm22304-201ENSMUST00000082688 129 ntBASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Gm23738-201ENSMUST00000082828 171 ntBASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Rpa3Q9CQ71 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Gm24096-201ENSMUST00000103905 110 ntBASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Gm22939-201ENSMUST00000103958 131 ntBASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Gm11843-201ENSMUST00000118984 425 ntBASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Gm17075-201ENSMUST00000171924 670 ntBASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Gm28191-201ENSMUST00000189112 211 ntBASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Ighv1-41-201ENSMUST00000194414 329 ntBASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Gm45701-201ENSMUST00000212049 235 ntBASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Gm5175-202ENSMUST00000219699 529 ntBASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 Gm4263-202ENSMUST00000221392 667 ntBASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.14□□□□□ -1.91
Rpa3Q9CQ71 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms