Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm14534-201ENSMUST00000120045 357 ntBASIC3.15□□□□□ -1.91
Use1Q9CQ56 Gm22986-201ENSMUST00000122753 130 ntBASIC3.15□□□□□ -1.91
Use1Q9CQ56 Gm16359-201ENSMUST00000124511 289 ntBASIC3.15□□□□□ -1.91
Use1Q9CQ56 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.15□□□□□ -1.91
Use1Q9CQ56 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Use1Q9CQ56 Gm27033-201ENSMUST00000183226 544 ntBASIC3.15□□□□□ -1.91
Use1Q9CQ56 Gm27834-201ENSMUST00000183427 125 ntBASIC3.15□□□□□ -1.91
Use1Q9CQ56 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Use1Q9CQ56 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC3.15□□□□□ -1.91
Use1Q9CQ56 Gm44300-201ENSMUST00000196792 121 ntBASIC3.15□□□□□ -1.91
Use1Q9CQ56 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.15□□□□□ -1.91
Use1Q9CQ56 AC163664.1-201ENSMUST00000226251 1248 ntBASIC3.15□□□□□ -1.91
Use1Q9CQ56 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Use1Q9CQ56 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Use1Q9CQ56 Gm10237-201ENSMUST00000078393 273 ntBASIC3.15□□□□□ -1.91
Use1Q9CQ56 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Use1Q9CQ56 Gm25699-201ENSMUST00000082896 167 ntBASIC3.15□□□□□ -1.91
Use1Q9CQ56 Gm23850-201ENSMUST00000083830 169 ntBASIC3.15□□□□□ -1.91
Use1Q9CQ56 Olfr661-201ENSMUST00000098168 964 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Use1Q9CQ56 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.15□□□□□ -1.91
Use1Q9CQ56 Gm8675-201ENSMUST00000201408 1856 ntBASIC3.15□□□□□ -1.91
Use1Q9CQ56 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Use1Q9CQ56 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Use1Q9CQ56 AC164297.6-201ENSMUST00000224643 1568 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm24125-201ENSMUST00000104105 137 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Use1Q9CQ56 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm11898-201ENSMUST00000117161 385 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm12509-201ENSMUST00000118033 609 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm15733-201ENSMUST00000132957 242 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm23602-201ENSMUST00000157258 132 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm27592-201ENSMUST00000157729 126 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm22174-201ENSMUST00000175050 125 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm22692-201ENSMUST00000175055 125 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm27634-201ENSMUST00000175060 126 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm22460-201ENSMUST00000175269 124 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm25535-201ENSMUST00000175364 125 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm24365-201ENSMUST00000175384 125 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm44310-201ENSMUST00000175424 126 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm22639-201ENSMUST00000175591 125 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm24979-201ENSMUST00000178626 126 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm26988-201ENSMUST00000183296 945 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Mir6986-201ENSMUST00000184483 58 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm27743-201ENSMUST00000185136 126 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm28785-201ENSMUST00000187478 379 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm20811-201ENSMUST00000190500 553 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm18660-201ENSMUST00000199542 629 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Use1Q9CQ56 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.14□□□□□ -1.91
Use1Q9CQ56 Gm6841-201ENSMUST00000220602 598 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Use1Q9CQ56 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC3.14□□□□□ -1.91
Use1Q9CQ56 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Use1Q9CQ56 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Use1Q9CQ56 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC3.13□□□□□ -1.91
Use1Q9CQ56 Gm7123-201ENSMUST00000117647 213 ntBASIC3.13□□□□□ -1.91
Use1Q9CQ56 Gm12591-201ENSMUST00000122407 1177 ntBASIC3.13□□□□□ -1.91
Use1Q9CQ56 Gm23773-201ENSMUST00000158985 296 ntBASIC3.13□□□□□ -1.91
Use1Q9CQ56 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.13□□□□□ -1.91
Use1Q9CQ56 Gm8902-201ENSMUST00000174341 1096 ntBASIC3.13□□□□□ -1.91
Use1Q9CQ56 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.13□□□□□ -1.91
Use1Q9CQ56 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Use1Q9CQ56 Gm10925-201ENSMUST00000189941 678 ntBASIC3.13□□□□□ -1.91
Use1Q9CQ56 Gm29704-201ENSMUST00000196011 253 ntBASIC3.13□□□□□ -1.91
Use1Q9CQ56 Gm43489-201ENSMUST00000196810 993 ntBASIC3.13□□□□□ -1.91
Use1Q9CQ56 Gm35931-201ENSMUST00000203931 448 ntBASIC3.13□□□□□ -1.91
Use1Q9CQ56 Gm7443-201ENSMUST00000206355 378 ntBASIC3.13□□□□□ -1.91
Use1Q9CQ56 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.13□□□□□ -1.91
Use1Q9CQ56 Gm18120-201ENSMUST00000220079 511 ntBASIC3.13□□□□□ -1.91
Use1Q9CQ56 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.13□□□□□ -1.91
Use1Q9CQ56 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.13□□□□□ -1.91
Use1Q9CQ56 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Use1Q9CQ56 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.13□□□□□ -1.91
Use1Q9CQ56 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Use1Q9CQ56 Gm25630-201ENSMUST00000084000 162 ntBASIC3.13□□□□□ -1.91
Use1Q9CQ56 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Use1Q9CQ56 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.13□□□□□ -1.91
Use1Q9CQ56 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Use1Q9CQ56 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Use1Q9CQ56 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Use1Q9CQ56 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.12□□□□□ -1.91
Use1Q9CQ56 Ssxb9-201ENSMUST00000115584 879 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm15018-201ENSMUST00000117090 633 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm12025-201ENSMUST00000117768 144 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm13678-201ENSMUST00000118926 340 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Use1Q9CQ56 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC3.12□□□□□ -1.91
Use1Q9CQ56 Gm22766-201ENSMUST00000158372 99 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms