Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm9892-201ENSMUST00000182415 992 ntBASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Gm17946-201ENSMUST00000186856 538 ntBASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Gm29196-201ENSMUST00000189239 618 ntBASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Gm29428-201ENSMUST00000190086 409 ntBASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Gm28337-201ENSMUST00000190425 666 ntBASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Gm36984-201ENSMUST00000192770 235 ntBASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Gm31511-201ENSMUST00000193134 657 ntBASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Gm34015-201ENSMUST00000194908 451 ntBASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Gm36953-201ENSMUST00000195295 268 ntBASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Gm43043-201ENSMUST00000196579 412 ntBASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Gm44032-201ENSMUST00000204841 166 ntBASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Gm45023-201ENSMUST00000207951 379 ntBASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Zfp980-201ENSMUST00000105738 4006 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Pcdha9Q91Y11 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
Pcdha9Q91Y11 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Gm37630-201ENSMUST00000194210 1456 ntBASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Gm11673-201ENSMUST00000117846 331 ntBASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Gm12900-201ENSMUST00000120919 573 ntBASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Gm23538-201ENSMUST00000157535 101 ntBASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Gm17155-201ENSMUST00000165969 473 ntBASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Gm9613-201ENSMUST00000171662 196 ntBASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Mir6537-201ENSMUST00000184150 110 ntBASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Gm28151-201ENSMUST00000189404 951 ntBASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Ighv3-7-201ENSMUST00000193370 348 ntBASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Gm43652-201ENSMUST00000196219 675 ntBASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 AC192333.2-201ENSMUST00000224771 196 ntBASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Pcdha9Q91Y11 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Gm11432-201ENSMUST00000117334 231 ntBASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Gm16179-201ENSMUST00000120685 373 ntBASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Gm14362-201ENSMUST00000121679 273 ntBASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Gm15254-201ENSMUST00000149567 273 ntBASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Gm23171-201ENSMUST00000157159 264 ntBASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Gm24060-201ENSMUST00000157494 95 ntBASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Gm25706-201ENSMUST00000157828 247 ntBASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Gm23023-201ENSMUST00000158767 109 ntBASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Gm25365-201ENSMUST00000158852 121 ntBASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Gm25037-201ENSMUST00000175418 110 ntBASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Gm27233-201ENSMUST00000184030 307 ntBASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Gm28785-201ENSMUST00000187478 379 ntBASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Gm28661-201ENSMUST00000188231 681 ntBASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Gm18291-201ENSMUST00000190791 301 ntBASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Gm36259-201ENSMUST00000197340 392 ntBASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Gm43494-201ENSMUST00000197672 388 ntBASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 AC125531.1-201ENSMUST00000219849 221 ntBASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Gm10038-201ENSMUST00000077233 441 ntBASIC4.51□□□□□ -1.69
Pcdha9Q91Y11 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 117.3 ms