Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Gm9850-201ENSMUST00000117916 227 ntBASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Gm8260-201ENSMUST00000119230 353 ntBASIC2.4□□□□□ -2.03
Nup35Q8R4R6 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC2.4□□□□□ -2.03
Nup35Q8R4R6 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Gm22766-201ENSMUST00000158372 99 ntBASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Gm24736-201ENSMUST00000158862 130 ntBASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Fth-ps2-201ENSMUST00000168364 516 ntBASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Gm38098-201ENSMUST00000194115 241 ntBASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Gm37495-201ENSMUST00000194590 264 ntBASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Gm19039-201ENSMUST00000204363 575 ntBASIC2.4□□□□□ -2.03
Nup35Q8R4R6 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC2.4□□□□□ -2.03
Nup35Q8R4R6 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Nup35Q8R4R6 AC159246.1-201ENSMUST00000214478 249 ntBASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.4□□□□□ -2.03
Nup35Q8R4R6 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC2.4□□□□□ -2.03
Nup35Q8R4R6 AC134468.2-201ENSMUST00000222549 672 ntBASIC2.4□□□□□ -2.03
Nup35Q8R4R6 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Gm23297-201ENSMUST00000083184 127 ntBASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Gm7739-201ENSMUST00000221131 1560 ntBASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Nup35Q8R4R6 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Nup35Q8R4R6 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.39□□□□□ -2.03
Nup35Q8R4R6 Gm23948-201ENSMUST00000104030 132 ntBASIC2.39□□□□□ -2.03
Nup35Q8R4R6 Gm25833-201ENSMUST00000104137 133 ntBASIC2.39□□□□□ -2.03
Nup35Q8R4R6 Gm15116-201ENSMUST00000122248 663 ntBASIC2.39□□□□□ -2.03
Nup35Q8R4R6 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC2.39□□□□□ -2.03
Nup35Q8R4R6 Gm22320-201ENSMUST00000157149 312 ntBASIC2.39□□□□□ -2.03
Nup35Q8R4R6 Mir6963-201ENSMUST00000183535 71 ntBASIC2.39□□□□□ -2.03
Nup35Q8R4R6 Gm27233-201ENSMUST00000184030 307 ntBASIC2.39□□□□□ -2.03
Nup35Q8R4R6 Mir6986-201ENSMUST00000184483 58 ntBASIC2.39□□□□□ -2.03
Nup35Q8R4R6 Gm37007-201ENSMUST00000194234 319 ntBASIC2.39□□□□□ -2.03
Nup35Q8R4R6 Gm33973-201ENSMUST00000195148 534 ntBASIC2.39□□□□□ -2.03
Nup35Q8R4R6 Gm25203-202ENSMUST00000200458 216 ntBASIC2.39□□□□□ -2.03
Nup35Q8R4R6 Gm18327-201ENSMUST00000202426 830 ntBASIC2.39□□□□□ -2.03
Nup35Q8R4R6 Gm44030-201ENSMUST00000204865 432 ntBASIC2.39□□□□□ -2.03
Nup35Q8R4R6 Gm44513-201ENSMUST00000206811 439 ntBASIC2.39□□□□□ -2.03
Nup35Q8R4R6 Gm34272-201ENSMUST00000208886 253 ntBASIC2.39□□□□□ -2.03
Nup35Q8R4R6 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC2.39□□□□□ -2.03
Nup35Q8R4R6 AC122924.1-201ENSMUST00000222044 163 ntBASIC2.39□□□□□ -2.03
Nup35Q8R4R6 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.39□□□□□ -2.03
Nup35Q8R4R6 AC091783.5-201ENSMUST00000224928 671 ntBASIC2.39□□□□□ -2.03
Nup35Q8R4R6 AC140210.1-201ENSMUST00000224961 534 ntBASIC2.39□□□□□ -2.03
Nup35Q8R4R6 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Nup35Q8R4R6 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Nup35Q8R4R6 Gm25203-201ENSMUST00000082842 215 ntBASIC2.39□□□□□ -2.03
Nup35Q8R4R6 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Nup35Q8R4R6 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.39□□□□□ -2.03
Nup35Q8R4R6 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Nup35Q8R4R6 n-R5s31-201ENSMUST00000104162 110 ntBASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Mir294-201ENSMUST00000104710 84 ntBASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Gm24855-201ENSMUST00000104848 97 ntBASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Gm13614-201ENSMUST00000117306 503 ntBASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Gm14518-201ENSMUST00000117351 542 ntBASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Gm14142-201ENSMUST00000117833 296 ntBASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Gm15190-201ENSMUST00000120855 276 ntBASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Gm13210-201ENSMUST00000121483 273 ntBASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Gm15065-201ENSMUST00000121699 273 ntBASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Gm4479-201ENSMUST00000178807 171 ntBASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Gm28191-201ENSMUST00000189112 211 ntBASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Gm37193-201ENSMUST00000193087 513 ntBASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Gm43489-201ENSMUST00000196810 993 ntBASIC2.38□□□□□ -2.03
Nup35Q8R4R6 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Gm18660-201ENSMUST00000199542 629 ntBASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Gm45245-201ENSMUST00000210082 376 ntBASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Gm45273-201ENSMUST00000211559 281 ntBASIC2.38□□□□□ -2.03
Nup35Q8R4R6 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Gm46369-201ENSMUST00000221577 401 ntBASIC2.38□□□□□ -2.03
Nup35Q8R4R6 AC239878.1-201ENSMUST00000224212 506 ntBASIC2.38□□□□□ -2.03
Nup35Q8R4R6 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.38□□□□□ -2.03
Nup35Q8R4R6 AC098719.1-201ENSMUST00000228920 371 ntBASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.38□□□□□ -2.03
Nup35Q8R4R6 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Mir499-201ENSMUST00000102357 79 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Gm24119-201ENSMUST00000103979 246 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Gm11414-201ENSMUST00000121795 263 ntBASIC2.37□□□□□ -2.03
Nup35Q8R4R6 Gm22026-201ENSMUST00000122735 281 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms