Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Fth-ps2-201ENSMUST00000168364 516 ntBASIC4.36□□□□□ -1.71
CopaQ8CIE6 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC4.36□□□□□ -1.71
CopaQ8CIE6 Gm5709-201ENSMUST00000177879 1165 ntBASIC4.36□□□□□ -1.71
CopaQ8CIE6 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC4.36□□□□□ -1.71
CopaQ8CIE6 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC4.36□□□□□ -1.71
CopaQ8CIE6 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC4.36□□□□□ -1.71
CopaQ8CIE6 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC4.36□□□□□ -1.71
CopaQ8CIE6 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC4.36□□□□□ -1.71
CopaQ8CIE6 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC4.36□□□□□ -1.71
CopaQ8CIE6 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.36□□□□□ -1.71
CopaQ8CIE6 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.36□□□□□ -1.71
CopaQ8CIE6 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.36□□□□□ -1.71
CopaQ8CIE6 Gm6802-202ENSMUST00000186566 126 ntBASIC4.36□□□□□ -1.71
CopaQ8CIE6 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CopaQ8CIE6 Trbv22-201ENSMUST00000191697 291 ntBASIC4.36□□□□□ -1.71
CopaQ8CIE6 Gm43043-201ENSMUST00000196579 412 ntBASIC4.36□□□□□ -1.71
CopaQ8CIE6 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC4.36□□□□□ -1.71
CopaQ8CIE6 Gm44118-201ENSMUST00000204665 229 ntBASIC4.36□□□□□ -1.71
CopaQ8CIE6 Gm7587-201ENSMUST00000207618 1021 ntBASIC4.36□□□□□ -1.71
CopaQ8CIE6 Gm20039-201ENSMUST00000210329 394 ntBASIC4.36□□□□□ -1.71
CopaQ8CIE6 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.36□□□□□ -1.71
CopaQ8CIE6 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.36□□□□□ -1.71
CopaQ8CIE6 CT010480.5-201ENSMUST00000225026 217 ntBASIC4.36□□□□□ -1.71
CopaQ8CIE6 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.36□□□□□ -1.71
CopaQ8CIE6 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CopaQ8CIE6 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CopaQ8CIE6 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC4.36□□□□□ -1.71
CopaQ8CIE6 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CopaQ8CIE6 Gm23510-201ENSMUST00000083083 163 ntBASIC4.36□□□□□ -1.71
CopaQ8CIE6 Gm24610-201ENSMUST00000083270 109 ntBASIC4.36□□□□□ -1.71
CopaQ8CIE6 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CopaQ8CIE6 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CopaQ8CIE6 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CopaQ8CIE6 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CopaQ8CIE6 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CopaQ8CIE6 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CopaQ8CIE6 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CopaQ8CIE6 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.36□□□□□ -1.71
CopaQ8CIE6 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CopaQ8CIE6 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CopaQ8CIE6 AC162910.1-201ENSMUST00000221219 1723 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CopaQ8CIE6 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 Gm23273-201ENSMUST00000104058 135 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 Mir465c-2-201ENSMUST00000104757 81 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 Gm15553-201ENSMUST00000118757 430 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 Gm12719-201ENSMUST00000118859 241 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 Gm11352-201ENSMUST00000119264 517 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 Gm13602-201ENSMUST00000122405 493 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CopaQ8CIE6 Gm22036-201ENSMUST00000157279 215 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 Gm24060-201ENSMUST00000157494 95 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 Gm22765-201ENSMUST00000158371 128 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 Gm26362-201ENSMUST00000158865 315 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.35□□□□□ -1.71
CopaQ8CIE6 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 Gm26177-201ENSMUST00000178683 107 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 Gm21816-201ENSMUST00000179255 360 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CopaQ8CIE6 Gm43114-201ENSMUST00000198298 343 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CopaQ8CIE6 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.35□□□□□ -1.71
CopaQ8CIE6 Gm44650-201ENSMUST00000206929 194 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 Gm7093-201ENSMUST00000223004 581 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 AC115878.1-201ENSMUST00000227247 334 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CopaQ8CIE6 Mir28a-201ENSMUST00000083560 86 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 Mir465c-1-201ENSMUST00000093560 81 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CopaQ8CIE6 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CopaQ8CIE6 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.35□□□□□ -1.71
CopaQ8CIE6 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CopaQ8CIE6 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.34□□□□□ -1.71
CopaQ8CIE6 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.34□□□□□ -1.71
CopaQ8CIE6 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
CopaQ8CIE6 Gm43736-201ENSMUST00000196377 2281 ntBASIC4.34□□□□□ -1.71
CopaQ8CIE6 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.34□□□□□ -1.71
CopaQ8CIE6 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CopaQ8CIE6 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CopaQ8CIE6 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.34□□□□□ -1.71
CopaQ8CIE6 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CopaQ8CIE6 Gm24120-201ENSMUST00000103978 129 ntBASIC4.34□□□□□ -1.71
CopaQ8CIE6 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CopaQ8CIE6 Gm11372-201ENSMUST00000117348 570 ntBASIC4.34□□□□□ -1.71
CopaQ8CIE6 Gm12982-201ENSMUST00000117408 190 ntBASIC4.34□□□□□ -1.71
CopaQ8CIE6 Gm12509-201ENSMUST00000118033 609 ntBASIC4.34□□□□□ -1.71
CopaQ8CIE6 Gm14753-201ENSMUST00000118503 246 ntBASIC4.34□□□□□ -1.71
CopaQ8CIE6 Gm14835-201ENSMUST00000119039 315 ntBASIC4.34□□□□□ -1.71
CopaQ8CIE6 Gm11262-201ENSMUST00000119326 833 ntBASIC4.34□□□□□ -1.71
CopaQ8CIE6 Gm11357-201ENSMUST00000119758 954 ntBASIC4.34□□□□□ -1.71
CopaQ8CIE6 Gm7363-201ENSMUST00000119883 399 ntBASIC4.34□□□□□ -1.71
CopaQ8CIE6 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.34□□□□□ -1.71
CopaQ8CIE6 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC4.34□□□□□ -1.71
CopaQ8CIE6 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC4.34□□□□□ -1.71
CopaQ8CIE6 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CopaQ8CIE6 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms