Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc28aQ8CEI3 Mir27a-201ENSMUST00000083510 87 ntBASIC3.06□□□□□ -1.92
Ccdc28aQ8CEI3 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc28aQ8CEI3 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Ccdc28aQ8CEI3 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ccdc28aQ8CEI3 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.06□□□□□ -1.92
Ccdc28aQ8CEI3 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
Ccdc28aQ8CEI3 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
Ccdc28aQ8CEI3 Gm36962-201ENSMUST00000192114 1761 ntBASIC3.05□□□□□ -1.92
Ccdc28aQ8CEI3 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Ccdc28aQ8CEI3 Gm8734-201ENSMUST00000211669 1312 ntBASIC3.05□□□□□ -1.92
Ccdc28aQ8CEI3 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ccdc28aQ8CEI3 Gm3940-201ENSMUST00000105087 432 ntBASIC3.05□□□□□ -1.92
Ccdc28aQ8CEI3 Gm22956-201ENSMUST00000122520 80 ntBASIC3.05□□□□□ -1.92
Ccdc28aQ8CEI3 Gm24730-201ENSMUST00000158228 117 ntBASIC3.05□□□□□ -1.92
Ccdc28aQ8CEI3 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ccdc28aQ8CEI3 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC3.05□□□□□ -1.92
Ccdc28aQ8CEI3 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Ccdc28aQ8CEI3 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Ccdc28aQ8CEI3 Gm18899-201ENSMUST00000217663 546 ntBASIC3.05□□□□□ -1.92
Ccdc28aQ8CEI3 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Ccdc28aQ8CEI3 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ccdc28aQ8CEI3 Gm23297-201ENSMUST00000083184 127 ntBASIC3.05□□□□□ -1.92
Ccdc28aQ8CEI3 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.05□□□□□ -1.92
Ccdc28aQ8CEI3 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Ccdc28aQ8CEI3 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Mir499-201ENSMUST00000102357 79 ntBASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Gm25727-201ENSMUST00000104522 131 ntBASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Gm14825-201ENSMUST00000113538 701 ntBASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Gm14907-201ENSMUST00000121948 854 ntBASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Gm14804-201ENSMUST00000122322 508 ntBASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Gm23325-201ENSMUST00000157422 129 ntBASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Gm24736-201ENSMUST00000158862 130 ntBASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Gm25971-201ENSMUST00000158953 286 ntBASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Gm15946-201ENSMUST00000160654 423 ntBASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Gm25470-201ENSMUST00000175576 111 ntBASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Gm37418-201ENSMUST00000195031 274 ntBASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 AC142499.1-201ENSMUST00000220036 374 ntBASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 AC170086.1-201ENSMUST00000225190 497 ntBASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Gm26064-201ENSMUST00000083381 109 ntBASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.04□□□□□ -1.92
Ccdc28aQ8CEI3 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Gm23609-201ENSMUST00000104542 127 ntBASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Mir294-201ENSMUST00000104710 84 ntBASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Gm13349-201ENSMUST00000118436 411 ntBASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Gm12954-201ENSMUST00000118610 611 ntBASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Gm9119-201ENSMUST00000118866 495 ntBASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Gm11843-201ENSMUST00000118984 425 ntBASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Gm25341-201ENSMUST00000157461 268 ntBASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Gm24505-201ENSMUST00000157682 126 ntBASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Gm22789-201ENSMUST00000157884 130 ntBASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Gm23895-201ENSMUST00000158108 160 ntBASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Gm42438-201ENSMUST00000197832 974 ntBASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Gm43239-201ENSMUST00000200131 201 ntBASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Gm44208-201ENSMUST00000205199 421 ntBASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 AC154562.1-201ENSMUST00000226140 966 ntBASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Gm23925-201ENSMUST00000082471 132 ntBASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.03□□□□□ -1.92
Ccdc28aQ8CEI3 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Gm24792-201ENSMUST00000104286 128 ntBASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Gm11488-201ENSMUST00000117277 863 ntBASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Gm12782-201ENSMUST00000117519 727 ntBASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Gm14142-201ENSMUST00000117833 296 ntBASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Gm6274-201ENSMUST00000118173 797 ntBASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Gm11829-201ENSMUST00000121003 282 ntBASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Gm12276-201ENSMUST00000121709 301 ntBASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Gm25807-201ENSMUST00000122783 305 ntBASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Gm23409-201ENSMUST00000158516 237 ntBASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Gm18354-201ENSMUST00000173515 1068 ntBASIC3.02□□□□□ -1.93
Ccdc28aQ8CEI3 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms