Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 Gm43810-201ENSMUST00000201018 232 ntBASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 Gm42850-201ENSMUST00000202094 201 ntBASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 Gm7468-201ENSMUST00000203900 652 ntBASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 Gm19237-201ENSMUST00000205036 1132 ntBASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 Gm45912-201ENSMUST00000210646 543 ntBASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 Gm18388-201ENSMUST00000222339 557 ntBASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 AC134468.2-201ENSMUST00000222549 672 ntBASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 AC117656.3-202ENSMUST00000225842 1055 ntBASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 Gm25481-201ENSMUST00000083221 158 ntBASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 Gm23456-201ENSMUST00000083335 137 ntBASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 Gm7676-201ENSMUST00000084055 319 ntBASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 Gm14445-201ENSMUST00000117051 1484 ntBASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Ccdc28bQ8CEG5 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Gm24890-201ENSMUST00000104389 102 ntBASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Gm12982-201ENSMUST00000117408 190 ntBASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Gm12328-201ENSMUST00000118611 197 ntBASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Gm14688-201ENSMUST00000119169 303 ntBASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Gm13603-201ENSMUST00000119404 83 ntBASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Gm14534-201ENSMUST00000120045 357 ntBASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Gm11896-201ENSMUST00000121105 820 ntBASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Gm14506-201ENSMUST00000121165 536 ntBASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Gm11403-201ENSMUST00000122195 369 ntBASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 AC124542.1-201ENSMUST00000205588 908 ntBASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Gm45523-201ENSMUST00000210712 799 ntBASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.59□□□□□ -1.83
Ccdc28bQ8CEG5 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Ccdc28bQ8CEG5 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Ccdc28bQ8CEG5 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.59□□□□□ -1.84
Ccdc28bQ8CEG5 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
Ccdc28bQ8CEG5 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Gm12125-201ENSMUST00000117261 736 ntBASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Gm12739-201ENSMUST00000119769 382 ntBASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Gm25104-201ENSMUST00000122476 163 ntBASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Gm16490-201ENSMUST00000165299 351 ntBASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Mir5127-201ENSMUST00000175295 71 ntBASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Gm18727-201ENSMUST00000185981 553 ntBASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Gm9775-201ENSMUST00000189402 331 ntBASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Gm37946-201ENSMUST00000192064 347 ntBASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Gm37979-201ENSMUST00000193065 712 ntBASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Gm19066-201ENSMUST00000193232 1078 ntBASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Gm37416-201ENSMUST00000193596 318 ntBASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Gm44354-201ENSMUST00000196017 143 ntBASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Gm8820-201ENSMUST00000204077 571 ntBASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Gm17780-201ENSMUST00000207142 612 ntBASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 AC166358.6-201ENSMUST00000221834 1206 ntBASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 AC117814.1-201ENSMUST00000226135 352 ntBASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 AC144798.1-201ENSMUST00000228120 391 ntBASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 AC168062.2-201ENSMUST00000228907 422 ntBASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Ccdc28bQ8CEG5 Gm10115-201ENSMUST00000076071 1228 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms