Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gnrh1-202ENSMUST00000223929 428 ntBASIC4.22□□□□□ -1.73
Nup88Q8CEC0 AC154640.2-201ENSMUST00000226324 472 ntBASIC4.22□□□□□ -1.73
Nup88Q8CEC0 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.22□□□□□ -1.73
Nup88Q8CEC0 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Nup88Q8CEC0 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Nup88Q8CEC0 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Nup88Q8CEC0 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Nup88Q8CEC0 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Nup88Q8CEC0 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Nup88Q8CEC0 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Nup88Q8CEC0 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Nup88Q8CEC0 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Nup88Q8CEC0 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Nup88Q8CEC0 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Nup88Q8CEC0 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Nup88Q8CEC0 Gm12568-201ENSMUST00000117362 624 ntBASIC4.21□□□□□ -1.74
Nup88Q8CEC0 Gm16017-201ENSMUST00000119834 208 ntBASIC4.21□□□□□ -1.74
Nup88Q8CEC0 Gm14687-201ENSMUST00000120206 363 ntBASIC4.21□□□□□ -1.74
Nup88Q8CEC0 Gm23168-201ENSMUST00000157156 143 ntBASIC4.21□□□□□ -1.74
Nup88Q8CEC0 Gm24537-201ENSMUST00000157950 102 ntBASIC4.21□□□□□ -1.74
Nup88Q8CEC0 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Nup88Q8CEC0 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Nup88Q8CEC0 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Nup88Q8CEC0 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Nup88Q8CEC0 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC4.21□□□□□ -1.74
Nup88Q8CEC0 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Nup88Q8CEC0 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC4.21□□□□□ -1.74
Nup88Q8CEC0 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.21□□□□□ -1.74
Nup88Q8CEC0 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC4.21□□□□□ -1.74
Nup88Q8CEC0 Gm43142-201ENSMUST00000198670 361 ntBASIC4.21□□□□□ -1.74
Nup88Q8CEC0 Gm42758-201ENSMUST00000202146 283 ntBASIC4.21□□□□□ -1.74
Nup88Q8CEC0 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.21□□□□□ -1.74
Nup88Q8CEC0 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC4.21□□□□□ -1.74
Nup88Q8CEC0 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.21□□□□□ -1.74
Nup88Q8CEC0 Gm25480-201ENSMUST00000083217 133 ntBASIC4.21□□□□□ -1.74
Nup88Q8CEC0 Gm37965-201ENSMUST00000195304 1362 ntBASIC4.21□□□□□ -1.74
Nup88Q8CEC0 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
Nup88Q8CEC0 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Nup88Q8CEC0 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
Nup88Q8CEC0 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Gm37887-201ENSMUST00000192752 2716 ntBASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Gm22590-201ENSMUST00000104247 128 ntBASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Gm15125-201ENSMUST00000116185 800 ntBASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Gm13064-201ENSMUST00000119125 557 ntBASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Gm14238-201ENSMUST00000120227 323 ntBASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Gm14739-201ENSMUST00000120424 802 ntBASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Gm9785-202ENSMUST00000144563 593 ntBASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Mir8118-201ENSMUST00000183962 129 ntBASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Gm18667-201ENSMUST00000186523 484 ntBASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Trbv8-201ENSMUST00000194020 285 ntBASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Gm36943-201ENSMUST00000194422 282 ntBASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Ighv1-79-201ENSMUST00000200152 350 ntBASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Gm44521-201ENSMUST00000206469 217 ntBASIC4.2□□□□□ -1.74
Nup88Q8CEC0 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Gm9973-202ENSMUST00000220926 166 ntBASIC4.2□□□□□ -1.74
Nup88Q8CEC0 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Olfr1151-201ENSMUST00000061081 927 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Gm26439-201ENSMUST00000082592 106 ntBASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Mir465-201ENSMUST00000093563 74 ntBASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Gm37999-201ENSMUST00000195178 1809 ntBASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.2□□□□□ -1.74
Nup88Q8CEC0 Gm42534-201ENSMUST00000196063 1754 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Olfr822-202ENSMUST00000216879 2663 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm6913-201ENSMUST00000100019 348 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm11408-201ENSMUST00000117889 519 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm13122-201ENSMUST00000118380 453 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm15026-201ENSMUST00000119219 458 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm15060-201ENSMUST00000119550 948 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm12578-201ENSMUST00000121244 417 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.19□□□□□ -1.74
Nup88Q8CEC0 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm23602-201ENSMUST00000157258 132 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm22380-201ENSMUST00000157479 95 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm3123-201ENSMUST00000163480 480 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm8403-201ENSMUST00000189712 1298 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Gm37575-201ENSMUST00000195467 309 ntBASIC4.19□□□□□ -1.74
Nup88Q8CEC0 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 116.3 ms