Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Usp40Q8BWR4 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Gm24281-201ENSMUST00000104234 136 ntBASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Gm25335-201ENSMUST00000158043 103 ntBASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Gm24905-201ENSMUST00000158129 104 ntBASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Gm20673-201ENSMUST00000177167 430 ntBASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Gm20794-201ENSMUST00000177626 628 ntBASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Gm21959-201ENSMUST00000178439 452 ntBASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Gm42451-201ENSMUST00000197410 244 ntBASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Gm2142-201ENSMUST00000197899 589 ntBASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Gm44431-201ENSMUST00000203500 413 ntBASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Gm44041-201ENSMUST00000203678 396 ntBASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Gm8132-201ENSMUST00000204938 640 ntBASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Gm44959-201ENSMUST00000209127 231 ntBASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Gm45375-201ENSMUST00000210338 280 ntBASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Gm45814-201ENSMUST00000212646 775 ntBASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Gm2628-201ENSMUST00000218019 426 ntBASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Gm23093-201ENSMUST00000083450 102 ntBASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Mir421-201ENSMUST00000083575 76 ntBASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Gm18180-201ENSMUST00000187562 1484 ntBASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Gm43317-201ENSMUST00000197924 2544 ntBASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Olfr657-202ENSMUST00000213297 1948 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Usp40Q8BWR4 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Gm25420-201ENSMUST00000104216 127 ntBASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Gm24079-201ENSMUST00000104352 132 ntBASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Gm12646-201ENSMUST00000119144 238 ntBASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Gm6587-201ENSMUST00000120219 613 ntBASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Gm12607-201ENSMUST00000120724 493 ntBASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Gm22216-201ENSMUST00000157557 114 ntBASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Gm25224-201ENSMUST00000158195 68 ntBASIC5.75□□□□□ -1.49
Usp40Q8BWR4 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Gm38150-201ENSMUST00000192996 452 ntBASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Gm43586-201ENSMUST00000195948 310 ntBASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Gm44879-201ENSMUST00000207007 503 ntBASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Usp40Q8BWR4 AC140344.1-201ENSMUST00000223384 387 ntBASIC5.75□□□□□ -1.49
Usp40Q8BWR4 AC139750.2-201ENSMUST00000224424 386 ntBASIC5.75□□□□□ -1.49
Usp40Q8BWR4 AC154335.1-201ENSMUST00000224744 395 ntBASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Gm44847-201ENSMUST00000207104 1991 ntBASIC5.75□□□□□ -1.49
Usp40Q8BWR4 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Gm44542-201ENSMUST00000208677 4314 ntBASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Usp40Q8BWR4 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Gm24792-201ENSMUST00000104286 128 ntBASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Gm14282-201ENSMUST00000119484 240 ntBASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Gm2182-201ENSMUST00000145243 663 ntBASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Gm14093-201ENSMUST00000145579 364 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Gm23579-201ENSMUST00000158528 103 ntBASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Gm22120-201ENSMUST00000175590 70 ntBASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Gm27428-201ENSMUST00000184289 110 ntBASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Gm27760-201ENSMUST00000185048 114 ntBASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Gm37418-201ENSMUST00000195031 274 ntBASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Gm43043-201ENSMUST00000196579 412 ntBASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Gm44295-201ENSMUST00000203805 437 ntBASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Gm44655-201ENSMUST00000207768 423 ntBASIC5.74□□□□□ -1.49
Usp40Q8BWR4 n-R5s54-201ENSMUST00000083837 112 ntBASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Usp40Q8BWR4 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC5.74□□□□□ -1.49
Usp40Q8BWR4 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms