Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm29573-201ENSMUST00000190291 919 ntBASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Ighv1-6-201ENSMUST00000193849 293 ntBASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm37575-201ENSMUST00000195467 309 ntBASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm9379-201ENSMUST00000196790 646 ntBASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm18429-201ENSMUST00000198707 421 ntBASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm45379-201ENSMUST00000211772 549 ntBASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm8942-201ENSMUST00000217892 400 ntBASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 AC132384.5-201ENSMUST00000218562 226 ntBASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm25205-201ENSMUST00000082841 103 ntBASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Ccdc40Q8BI79 Gm45130-201ENSMUST00000207574 3388 ntBASIC3.71□□□□□ -1.81
Ccdc40Q8BI79 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Gm8675-201ENSMUST00000201408 1856 ntBASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Gm14677-201ENSMUST00000117866 486 ntBASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Gm2288-201ENSMUST00000118560 638 ntBASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Gm6584-201ENSMUST00000119671 447 ntBASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Gm20399-201ENSMUST00000174652 132 ntBASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Mir5127-201ENSMUST00000175295 71 ntBASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Mir6933-201ENSMUST00000184982 81 ntBASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Gm43441-201ENSMUST00000201458 205 ntBASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Gm18268-201ENSMUST00000208445 943 ntBASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Olfr500-ps1-201ENSMUST00000208818 933 ntBASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Gm18903-201ENSMUST00000215343 480 ntBASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Gm3565-201ENSMUST00000222670 609 ntBASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 AC154419.1-201ENSMUST00000227627 272 ntBASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 AC074315.1-201ENSMUST00000228801 214 ntBASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Gm10704-201ENSMUST00000098952 730 ntBASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
Ccdc40Q8BI79 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Gm12803-201ENSMUST00000118907 821 ntBASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Gm27522-201ENSMUST00000183949 230 ntBASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Gm43489-201ENSMUST00000196810 993 ntBASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Gm37936-201ENSMUST00000194647 1322 ntBASIC3.7□□□□□ -1.82
Ccdc40Q8BI79 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 Mir291a-201ENSMUST00000104815 82 ntBASIC3.69□□□□□ -1.82
Ccdc40Q8BI79 Gm12578-201ENSMUST00000121244 417 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms