Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm25177-201ENSMUST00000122634 117 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm22453-201ENSMUST00000122801 318 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm25908-201ENSMUST00000157624 98 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm25386-201ENSMUST00000157814 288 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm3191-201ENSMUST00000167139 346 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm28785-201ENSMUST00000187478 379 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm29365-201ENSMUST00000189461 699 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 1700113H08Rik-203ENSMUST00000189775 798 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm38075-201ENSMUST00000191979 920 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm42566-201ENSMUST00000197120 643 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm44032-201ENSMUST00000204841 166 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm44879-201ENSMUST00000207007 503 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm44946-201ENSMUST00000208425 572 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm3442-201ENSMUST00000216808 710 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 AC153662.1-201ENSMUST00000222220 270 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 AC173481.1-201ENSMUST00000223351 270 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm26121-201ENSMUST00000083364 162 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm23097-201ENSMUST00000083448 105 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Ubfd1Q78JW9 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Gm3972-201ENSMUST00000173960 2861 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Gm14292-201ENSMUST00000118761 456 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Gm23463-201ENSMUST00000122468 99 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Gm5963-201ENSMUST00000143451 236 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Gm23554-201ENSMUST00000157818 110 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Gm25706-201ENSMUST00000157828 247 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Gm17109-201ENSMUST00000163985 358 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Gm23215-201ENSMUST00000178153 121 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Gm42622-201ENSMUST00000197229 355 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Gm43892-201ENSMUST00000204373 265 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Gm45023-201ENSMUST00000207951 379 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Gm7407-201ENSMUST00000208301 568 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Gm45498-201ENSMUST00000210346 283 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Gm18160-201ENSMUST00000214279 827 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 AC126673.2-201ENSMUST00000221052 686 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 AC122448.1-201ENSMUST00000226317 772 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Gm23503-201ENSMUST00000083903 107 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ubfd1Q78JW9 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm37630-201ENSMUST00000194210 1456 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm14421-201ENSMUST00000121755 1958 ntBASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Ubfd1Q78JW9 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms