Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Gm29730-201ENSMUST00000192986 1396 ntBASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Gm13785-201ENSMUST00000119099 690 ntBASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Gm12335-201ENSMUST00000119738 327 ntBASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Clec2f-201ENSMUST00000121051 374 ntBASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Gm26148-201ENSMUST00000157430 68 ntBASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Gm22135-201ENSMUST00000158752 108 ntBASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Gm16290-201ENSMUST00000161175 474 ntBASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Gm20612-201ENSMUST00000176318 236 ntBASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Mir6541-201ENSMUST00000183649 110 ntBASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Gm29065-201ENSMUST00000188786 487 ntTSL 3 BASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Gm37416-201ENSMUST00000193596 318 ntBASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Gm37097-201ENSMUST00000193676 336 ntBASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 CT010455.1-201ENSMUST00000218579 413 ntBASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 AC122924.2-201ENSMUST00000220799 298 ntBASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 AC122393.1-201ENSMUST00000226570 319 ntBASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 AC160930.1-201ENSMUST00000227194 337 ntBASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Gm23939-201ENSMUST00000082880 133 ntBASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Gm25821-201ENSMUST00000093657 133 ntBASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Olfr753-ps1-201ENSMUST00000174025 3121 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ddx55Q6ZPL9 Fnbp1l-203ENSMUST00000162947 1830 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Mir105-201ENSMUST00000104655 80 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Gm13482-201ENSMUST00000119842 254 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Gm13339-201ENSMUST00000120651 510 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Gm11829-201ENSMUST00000121003 282 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Mup-ps12-201ENSMUST00000126217 549 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Gm22156-201ENSMUST00000158409 141 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Gm17421-201ENSMUST00000167845 674 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Gm21729-201ENSMUST00000180058 664 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Gm21853-201ENSMUST00000180071 664 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Gm29647-201ENSMUST00000188795 666 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Gm29495-201ENSMUST00000189319 664 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Gm28504-201ENSMUST00000190977 666 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Gm35843-201ENSMUST00000193716 666 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Gm5551-201ENSMUST00000199720 690 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Gm45048-201ENSMUST00000207058 429 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 AC153971.2-201ENSMUST00000214553 777 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Gm7495-201ENSMUST00000215099 426 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 AC164117.2-201ENSMUST00000222090 327 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 n-R5s37-201ENSMUST00000082533 118 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Gm16261-201ENSMUST00000096813 205 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 AC101945.4-201ENSMUST00000228464 1976 ntBASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ddx55Q6ZPL9 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm43718-201ENSMUST00000197524 1857 ntBASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm26019-201ENSMUST00000104407 119 ntBASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm12268-201ENSMUST00000118398 442 ntBASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm11219-201ENSMUST00000118565 358 ntBASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm12458-201ENSMUST00000119387 495 ntBASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm24836-201ENSMUST00000122609 108 ntBASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm24553-201ENSMUST00000158653 131 ntBASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm20415-201ENSMUST00000172877 423 ntBASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm26177-201ENSMUST00000178683 107 ntBASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm27313-201ENSMUST00000183500 142 ntBASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm28146-201ENSMUST00000185517 701 ntBASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm28574-201ENSMUST00000185757 699 ntBASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm28397-201ENSMUST00000187970 699 ntBASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm29366-201ENSMUST00000190481 699 ntBASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm8939-201ENSMUST00000192577 964 ntBASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm36259-201ENSMUST00000197340 392 ntBASIC4.8□□□□□ -1.64
Ddx55Q6ZPL9 Gm42438-201ENSMUST00000197832 974 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms