Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Herc4Q6PAV2 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Herc4Q6PAV2 Gm5265-201ENSMUST00000076828 342 ntBASIC3.8□□□□□ -1.8
Herc4Q6PAV2 Gm23736-201ENSMUST00000082553 75 ntBASIC3.8□□□□□ -1.8
Herc4Q6PAV2 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Herc4Q6PAV2 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Herc4Q6PAV2 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Herc4Q6PAV2 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Herc4Q6PAV2 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.8□□□□□ -1.8
Herc4Q6PAV2 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.8□□□□□ -1.8
Herc4Q6PAV2 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Herc4Q6PAV2 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Herc4Q6PAV2 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Mir706-201ENSMUST00000102262 84 ntBASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Gm24987-201ENSMUST00000104453 134 ntBASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Gm14607-201ENSMUST00000119119 491 ntBASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Gm22036-201ENSMUST00000157279 215 ntBASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Gm22108-201ENSMUST00000177961 106 ntBASIC3.79□□□□□ -1.8
Herc4Q6PAV2 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Spin2g-201ENSMUST00000178425 687 ntBASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Gm24798-201ENSMUST00000179334 106 ntBASIC3.79□□□□□ -1.8
Herc4Q6PAV2 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Gm27233-201ENSMUST00000184030 307 ntBASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Gm7299-201ENSMUST00000194441 581 ntBASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Gm43675-201ENSMUST00000199468 1184 ntBASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 AC159476.2-201ENSMUST00000216221 418 ntBASIC3.79□□□□□ -1.8
Herc4Q6PAV2 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 AC099578.1-201ENSMUST00000220147 435 ntBASIC3.79□□□□□ -1.8
Herc4Q6PAV2 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Gm3565-201ENSMUST00000222670 609 ntBASIC3.79□□□□□ -1.8
Herc4Q6PAV2 CT030684.2-201ENSMUST00000228946 826 ntBASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Gm23452-201ENSMUST00000083327 107 ntBASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Herc4Q6PAV2 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Herc4Q6PAV2 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Herc4Q6PAV2 Mir208b-201ENSMUST00000104735 77 ntBASIC3.78□□□□□ -1.8
Herc4Q6PAV2 Gm15060-201ENSMUST00000119550 948 ntBASIC3.78□□□□□ -1.8
Herc4Q6PAV2 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.78□□□□□ -1.8
Herc4Q6PAV2 Gm24930-201ENSMUST00000158315 83 ntBASIC3.78□□□□□ -1.8
Herc4Q6PAV2 Gm17061-201ENSMUST00000163167 499 ntBASIC3.78□□□□□ -1.8
Herc4Q6PAV2 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Herc4Q6PAV2 Gm17655-201ENSMUST00000167969 255 ntBASIC3.78□□□□□ -1.8
Herc4Q6PAV2 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.78□□□□□ -1.8
Herc4Q6PAV2 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Herc4Q6PAV2 Gm20773-201ENSMUST00000178940 681 ntBASIC3.78□□□□□ -1.8
Herc4Q6PAV2 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Herc4Q6PAV2 Gm38231-201ENSMUST00000192030 347 ntBASIC3.78□□□□□ -1.8
Herc4Q6PAV2 Gm35876-201ENSMUST00000205044 459 ntBASIC3.78□□□□□ -1.8
Herc4Q6PAV2 Gm18602-201ENSMUST00000209794 851 ntBASIC3.78□□□□□ -1.8
Herc4Q6PAV2 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Herc4Q6PAV2 Gm39147-201ENSMUST00000211376 465 ntBASIC3.78□□□□□ -1.8
Herc4Q6PAV2 Gm45551-201ENSMUST00000211459 928 ntBASIC3.78□□□□□ -1.8
Herc4Q6PAV2 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.78□□□□□ -1.8
Herc4Q6PAV2 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.78□□□□□ -1.8
Herc4Q6PAV2 AC137871.2-201ENSMUST00000226482 289 ntBASIC3.78□□□□□ -1.8
Herc4Q6PAV2 Gm6369-201ENSMUST00000069626 412 ntBASIC3.78□□□□□ -1.8
Herc4Q6PAV2 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC3.78□□□□□ -1.8
Herc4Q6PAV2 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Herc4Q6PAV2 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.78□□□□□ -1.8
Herc4Q6PAV2 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Herc4Q6PAV2 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Herc4Q6PAV2 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Herc4Q6PAV2 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Herc4Q6PAV2 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.77□□□□□ -1.81
Herc4Q6PAV2 Gm5583-201ENSMUST00000174328 1519 ntBASIC3.77□□□□□ -1.81
Herc4Q6PAV2 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC3.77□□□□□ -1.81
Herc4Q6PAV2 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.77□□□□□ -1.81
Herc4Q6PAV2 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Herc4Q6PAV2 Gm23256-201ENSMUST00000102235 110 ntBASIC3.77□□□□□ -1.81
Herc4Q6PAV2 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Herc4Q6PAV2 Gm26140-201ENSMUST00000103807 110 ntBASIC3.77□□□□□ -1.81
Herc4Q6PAV2 Gm25727-201ENSMUST00000104522 131 ntBASIC3.77□□□□□ -1.81
Herc4Q6PAV2 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Herc4Q6PAV2 Gm12788-201ENSMUST00000119090 308 ntBASIC3.77□□□□□ -1.81
Herc4Q6PAV2 Gm13692-201ENSMUST00000120774 371 ntBASIC3.77□□□□□ -1.81
Herc4Q6PAV2 Gm12858-201ENSMUST00000121913 208 ntBASIC3.77□□□□□ -1.81
Herc4Q6PAV2 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.77□□□□□ -1.81
Herc4Q6PAV2 Gm13194-201ENSMUST00000142299 311 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 208.1 ms