Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Six3Q62233 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Six3Q62233 Gm6913-201ENSMUST00000100019 348 ntBASIC3.56□□□□□ -1.84
Six3Q62233 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Six3Q62233 Gm11372-201ENSMUST00000117348 570 ntBASIC3.56□□□□□ -1.84
Six3Q62233 Gm15263-201ENSMUST00000121556 642 ntBASIC3.56□□□□□ -1.84
Six3Q62233 Gm15147-201ENSMUST00000122263 483 ntBASIC3.56□□□□□ -1.84
Six3Q62233 Gm14713-201ENSMUST00000122362 686 ntBASIC3.56□□□□□ -1.84
Six3Q62233 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC3.56□□□□□ -1.84
Six3Q62233 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Six3Q62233 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.56□□□□□ -1.84
Six3Q62233 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Six3Q62233 Gm27308-201ENSMUST00000184807 233 ntBASIC3.56□□□□□ -1.84
Six3Q62233 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.56□□□□□ -1.84
Six3Q62233 Gm4854-201ENSMUST00000185902 574 ntBASIC3.56□□□□□ -1.84
Six3Q62233 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC3.56□□□□□ -1.84
Six3Q62233 Gm8498-201ENSMUST00000188227 974 ntBASIC3.56□□□□□ -1.84
Six3Q62233 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC3.56□□□□□ -1.84
Six3Q62233 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC3.56□□□□□ -1.84
Six3Q62233 Gm43559-201ENSMUST00000198755 466 ntBASIC3.56□□□□□ -1.84
Six3Q62233 Gm42453-201ENSMUST00000200477 409 ntBASIC3.56□□□□□ -1.84
Six3Q62233 Gm43954-201ENSMUST00000204634 544 ntBASIC3.56□□□□□ -1.84
Six3Q62233 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC3.56□□□□□ -1.84
Six3Q62233 AC153852.1-201ENSMUST00000217881 567 ntBASIC3.56□□□□□ -1.84
Six3Q62233 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.56□□□□□ -1.84
Six3Q62233 Gm35558-202ENSMUST00000221819 499 ntBASIC3.56□□□□□ -1.84
Six3Q62233 AC122937.1-201ENSMUST00000226405 793 ntBASIC3.56□□□□□ -1.84
Six3Q62233 AC158142.1-201ENSMUST00000226721 416 ntBASIC3.56□□□□□ -1.84
Six3Q62233 AC158142.2-201ENSMUST00000227892 635 ntBASIC3.56□□□□□ -1.84
Six3Q62233 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Six3Q62233 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.56□□□□□ -1.84
Six3Q62233 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.56□□□□□ -1.84
Six3Q62233 Mir346-201ENSMUST00000083547 98 ntBASIC3.56□□□□□ -1.84
Six3Q62233 Gm26165-201ENSMUST00000083791 138 ntBASIC3.56□□□□□ -1.84
Six3Q62233 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Six3Q62233 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Six3Q62233 Gm43092-201ENSMUST00000202986 1854 ntBASIC3.56□□□□□ -1.84
Six3Q62233 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Six3Q62233 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Six3Q62233 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Six3Q62233 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Six3Q62233 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Six3Q62233 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Six3Q62233 Mir294-201ENSMUST00000104710 84 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC3.55□□□□□ -1.84
Six3Q62233 Gm7974-201ENSMUST00000117154 408 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Gm15613-201ENSMUST00000118396 326 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Gm6584-201ENSMUST00000119671 447 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Gm12884-201ENSMUST00000120371 325 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC3.55□□□□□ -1.84
Six3Q62233 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Six3Q62233 Gm22561-201ENSMUST00000157331 84 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Snord92-201ENSMUST00000175548 85 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Gm7909-201ENSMUST00000182688 614 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Mir7676-1-201ENSMUST00000183491 62 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Mir7676-2-201ENSMUST00000183523 62 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Gm27445-201ENSMUST00000184484 72 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Mir7047-201ENSMUST00000184595 64 ntBASIC3.55□□□□□ -1.84
Six3Q62233 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Six3Q62233 Gm28926-201ENSMUST00000191063 680 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Gm38332-201ENSMUST00000194189 147 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Gm7142-201ENSMUST00000194232 586 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Gm7449-201ENSMUST00000194393 663 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Gm43070-201ENSMUST00000196938 415 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.55□□□□□ -1.84
Six3Q62233 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3.55□□□□□ -1.84
Six3Q62233 Gm44076-201ENSMUST00000203072 520 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.55□□□□□ -1.84
Six3Q62233 Gm2059-201ENSMUST00000212025 287 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.55□□□□□ -1.84
Six3Q62233 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.55□□□□□ -1.84
Six3Q62233 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.55□□□□□ -1.84
Six3Q62233 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Six3Q62233 Gm25126-201ENSMUST00000083343 102 ntBASIC3.55□□□□□ -1.84
Six3Q62233 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Six3Q62233 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Six3Q62233 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Six3Q62233 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Six3Q62233 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Six3Q62233 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Six3Q62233 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Six3Q62233 Gm42721-201ENSMUST00000197165 1523 ntBASIC3.54□□□□□ -1.84
Six3Q62233 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.54□□□□□ -1.84
Six3Q62233 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC3.54□□□□□ -1.84
Six3Q62233 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.54□□□□□ -1.84
Six3Q62233 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC3.54□□□□□ -1.84
Six3Q62233 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.54□□□□□ -1.84
Six3Q62233 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.54□□□□□ -1.84
Six3Q62233 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Six3Q62233 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Six3Q62233 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Six3Q62233 Mir599-201ENSMUST00000102378 88 ntBASIC3.54□□□□□ -1.84
Six3Q62233 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Six3Q62233 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Six3Q62233 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms